Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00384 ATGGAAATGGACATGTCTTCAAACACCAATAAGGACTTGTTCTCCTCTCCAACTCTCTCCCTCACCCTTGCTGGGATTTTTAATAACCAAATAGAGGAAATAGGGGATGAGGGAAGTAGAGAGTGTTCAAGGAAAGAGGACACCACCACCACTGTAAGCAGTGAGAATTCTGGGCCGTTGAGATCAAGATCAGATAATGATGATGATGGTGGTGGTGATGACGATGGGAGCAAGAAGAAGAAAAGAAAGAAGTATCATAGGCACACCGCTGGGCAGATCAGAGAAATGGAAGCGGTTTTCAAAGAATCCCCCCATCCAGATGAAAGCCAAAGGAAACAACTCAGCAAGCAATTAGGCCTTGCTCCAAGTCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGTCATGAAAGTTCGTTGTTGAAGAAAGAAATAGAGAAATTAATGGAGGAAAATAAGGCCATGAGAGAGGCCATAAGCAAATCTTGCTGCCCTAACTGTGGCATGGCCATGGCCACCACTTCTACTATCACTGATGATAGTTCCACCATCTCCATTGAAGAACAACAACTTCGTTTAGAAAATGCCAAACTCAAAGCTGAGATAGAGAAGCTACGAGAAGTTTCAGGGAAATACCCATCAGCTGGAACAATAACGTACCCTTCATGTTCAACTAGCCATGAGCAAGTAGATAATAATAGAATAAGCTCATCAATGGATTTTTACAATGGAATTTTTGGGGTTGAAAAATCAAGGATAATGGAGATAGTGAACCAAGCAATAGAGGAACTCATAAAGATGGCTACTATTGGAGAACCTTTATGGGTTCGTAGTGTTGAAACTGGTAGAGAAATACTCAACTATGATGAATATGAGAAGGTTTTTGAGGTTCACAATAATTCAAGAATTATTGGAAGAAGGTCAAACATGTCCATTGAAGCATCAAGAGAAAATGGAATGGTTTTTATGGACCTATCAAGTCTTGTCCAAAGTTTTCTAGATGTGAATCAATGGAAGGAGATGTTTCCATGCTTAATATCAAAGGCTGCAAATGTTGATGTTATATGCAATGGAGAAGGATCTAATAGCAATGGTGTTGTTCAACTGATGTTTGCTGAGTTGCAAATGCTGACACCAATGGTGGCAACAAGAGAAGTGTATTTCGTGAGATGCTGCAGAAAGTTAAGTGATGAAAAGTGGGGAATTGTTGATGTTTCCATAGACAAAGTAGAAGACAACATCGATGCTTCCCTTCTTAAATGCAGAAAACGCCCTTCTGGTTGCATTATTGAAGATAAGTCCCATGGTCATTGCAAGGTAAGTTGGGTGGAACACTGGGAATGCGAGAAAAGCAGTGTGCACAGAATGTATAGAAGCATTGTGAATAACGGTACAGCGTTTGGGGCAAGGCACTGGATATCAACACTGCAGCTTCAATGTCAACGCCTTGTTTTCTTCATGGCAACTAATGTTCCCATCAAGGATTCAACTGGTGTTGCCACATCAGCTGGAAGAAAGAGCATATTGAAGTTAGGAGAAAGAATGAGATGGAGTTTTTGCCATGCAATTGGAGCCTCAAGCTTCCATACATGGACAAAGGTGACAAGTAAAAATGGAGAAGACATTAGGATCAGTTCTAGGAAGAACTTGAATGATCCTGGTCAACCTCTTGGTGTCATCCTATCAGCTGTTTCTTCTGTGTGGCTTCCTCTCCCTCCAAATGTTCTTTTTCATTTCTTGAGGGATGAAAATCATAGGTCTCAGTGGGATATCATGGTCACTGGTGGGTCATCGGTGCAGTCCATAGCAACATTAGCCAAAGGCCAAGATCGGGGCAATGCTGTAAATATCCATGAGATTACATCAAAAGAAAACATCAAGTGGTGGATATTACAAGATAGCTCCACAAATGCTTATGAATCAATGGTAGTGTATGCTCCTGTGGACATTCCTAGCATGAAGAATGTGATGAATGGATGTGATTCAACCAACATTCCAATATTACCCTCAGGGTTCTCAATTCTCCCTGATGGGGTTGATTCAAGGCCATTGATTACTACTTCTACTACTATGATGCAGCAACAACAACAAGAAAATATGAATACTGTAGAAGGAGGGTCTTTGTTAACAATGGCATTCCAAGTAATTACTAATAATAATAGTAATGGTTCTCCATCATCAGCAAAATTGACTTTGGAGTCTGTGGAATCAGTCAAGAGTTTAGTTTCTTGTACATTAAGGAATATCAAATCATGTTTACAATGTGAAGAAGATTGA 2298 0.4038 MEMDMSSNTNKDLFSSPTLSLTLAGIFNNQIEEIGDEGSRECSRKEDTTTTVSSENSGPLRSRSDNDDDGGGDDDGSKKKKRKKYHRHTAGQIREMEAVFKESPHPDESQRKQLSKQLGLAPSQVKFWFQNRRTQIKAIQERHESSLLKKEIEKLMEENKAMREAISKSCCPNCGMAMATTSTITDDSSTISIEEQQLRLENAKLKAEIEKLREVSGKYPSAGTITYPSCSTSHEQVDNNRISSSMDFYNGIFGVEKSRIMEIVNQAIEELIKMATIGEPLWVRSVETGREILNYDEYEKVFEVHNNSRIIGRRSNMSIEASRENGMVFMDLSSLVQSFLDVNQWKEMFPCLISKAANVDVICNGEGSNSNGVVQLMFAELQMLTPMVATREVYFVRCCRKLSDEKWGIVDVSIDKVEDNIDASLLKCRKRPSGCIIEDKSHGHCKVSWVEHWECEKSSVHRMYRSIVNNGTAFGARHWISTLQLQCQRLVFFMATNVPIKDSTGVATSAGRKSILKLGERMRWSFCHAIGASSFHTWTKVTSKNGEDIRISSRKNLNDPGQPLGVILSAVSSVWLPLPPNVLFHFLRDENHRSQWDIMVTGGSSVQSIATLAKGQDRGNAVNIHEITSKENIKWWILQDSSTNAYESMVVYAPVDIPSMKNVMNGCDSTNIPILPSGFSILPDGVDSRPLITTSTTMMQQQQQENMNTVEGGSLLTMAFQVITNNNSNGSPSSAKLTLESVESVKSLVSCTLRNIKSCLQCEED 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00384 765 Coils Coil 193 215 - -
Aip09g00384 765 ProSiteProfiles 'Homeobox' domain profile. 79 139 IPR001356 GO:0003677
Aip09g00384 765 Coils Coil 138 168 - -
Aip09g00384 765 SUPERFAMILY Homeodomain-like 67 140 IPR009057 -
Aip09g00384 765 MobiDBLite consensus disorder prediction 32 93 - -
Aip09g00384 765 SUPERFAMILY Bet v1-like 509 687 - -
Aip09g00384 765 ProSitePatterns 'Homeobox' domain signature. 114 137 IPR017970 GO:0000981|GO:0006355
Aip09g00384 765 SMART HOX_1 81 143 IPR001356 GO:0003677
Aip09g00384 765 CDD homeodomain 86 137 IPR001356 GO:0003677
Aip09g00384 765 Pfam Homeodomain 82 137 IPR001356 GO:0003677
Aip09g00384 765 Pfam START domain 263 489 IPR002913 GO:0008289
Aip09g00384 765 MobiDBLite consensus disorder prediction 61 79 - -
Aip09g00384 765 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 12 763 IPR042160 -
Aip09g00384 765 SMART START_1 262 489 IPR002913 GO:0008289
Aip09g00384 765 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 12 763 - -
Aip09g00384 765 ProSiteProfiles START domain profile. 253 492 IPR002913 GO:0008289
Aip09g00384 765 SUPERFAMILY Bet v1-like 256 489 - -
Aip09g00384 765 MobiDBLite consensus disorder prediction 34 48 - -
Aip09g00384 765 CDD START_ArGLABRA2_like 257 488 - -
Aip09g00384 765 Gene3D - 71 156 - -
Aip09g00384 765 Gene3D - 280 489 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00384 Aip-Chr9 3832697 3846411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00384 52 764 Homeobox Transcription Factor Family AT1G79840 59.946 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aip09g00384 START 1.2e-50 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00384 K09338 - qsu:111988083 1006.51