Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00375 ATGAAGCGCCAGCCCATAGAAAAGCCCATGGACAATATGAACCATGTGTATAGTTACCATAATACCCTCAACCCTAAAATTGATGCCAAACTAACCAACACTGACACTCCACATTCTAGGGTTAGGGTTTCTTCTGCATCTGCTTCAATGGGGAAGGGAACAGGGAGCTTCGGAAAGAGAAGGAACAAGACTCACACGCTCTGTGTGAGGTGCGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGCTGCTCCGCTTGCGCCTTCCCTGCTGCCCGCAAGAGAAAATATAACTGGAGTGTGAAGGCCATTAGGAGAAAGACCACCGGAACCGGTAGGATGAGGTACTTGCGCCACGTCCCTCGCAGGTTCAAGAGTGGCTTCAGAGAAGGCACAGAAGCTGCACCAAGGAAGAGGGGAGCTGCTGCTACTGCCTAA 435 0.5218 MKRQPIEKPMDNMNHVYSYHNTLNPKIDAKLTNTDTPHSRVRVSSASASMGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAAATA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00375 144 MobiDBLite consensus disorder prediction 39 58 - -
Aip09g00375 144 Gene3D - 50 136 IPR011331 GO:0003735|GO:0005840|GO:0006412
Aip09g00375 144 ProSitePatterns Ribosomal protein L37e signature. 53 72 IPR018267 GO:0003735|GO:0005840|GO:0006412
Aip09g00375 144 PANTHER RIBOSOMAL PROTEIN L37 50 144 - -
Aip09g00375 144 SUPERFAMILY Zn-binding ribosomal proteins 50 104 IPR011332 GO:0006412
Aip09g00375 144 Hamap 50S ribosomal protein L37e [rpl37e]. 51 102 IPR001569 GO:0003735|GO:0005840|GO:0006412
Aip09g00375 144 Pfam Ribosomal protein L37e 52 102 IPR001569 GO:0003735|GO:0005840|GO:0006412
Aip09g00375 144 PANTHER 60S RIBOSOMAL PROTEIN L37 50 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00375 Aip-Chr9 3771217 3772096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00375 50 144 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 86.316 1.49e-57 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00375 K02922 - csv:101221537 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00375 09 3771217 3772096 Aip09g00375 09 3771217 3772096 ECH