Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00337 ATGGTCAGAGTTAATCTTCATCTTTCCTATGTACTATTGCTCATTTACTTCCTTTTTTGGGTCTTGATTAACACTACAAAAGCTGATGATATTGGTGTTTACTGGGGCCAAAATAGTGATGAGGGAACTCTTGCTAATACATGTGAATCAAGAAAGTACTCCTATGTAAACATAGCATTCCTTACCACATTTGGAAATGGTGAAACCCCGGTACTAAACCTGGAAGGACATTGTAATCCTTCTTCAAAAGGGTGCACTGGTCTTAGCTTAGATATCAAAAGTTGCCAGAAGCAAGGGATCAAGGTCATGCTCTCAATCGGAGGAGTATCCAGTACATCCCAATTGACTTCTTCTAAAGATGCTAAAAATGTTTCTGATTATCTCTGGAACAATTTCTTGGGTGGTAAGTCATCTTCGCGCCCTCTTGGGGATGCAGTGTTAGATGGGATAGAATTTAACCCAGGTGATAATGGATACTCAATATACTGGATGGACCTTGCGCGTTATCTCAAGTCCAACTCAACACAAAATGTGTCTATAGGTGCAGCTCCTCAATGCCCCCTTGTTAGTGCTGAGAACTCTACCTTTAGTAGTGGATATTTCGATTATCTTTCGGTACAATTCTACAACAATCCTCCATGCAATTTTGTGAGTAGCAGTACTAGTGGCTTCATAAATGCATGGCACCAATGGAGCAATTTGAAAGTGAAGAAAATATTTCTGGGGTTGCCAGCATCTTCTGATGAAGCTGCATCTGGCTATATTCCTGCAAATCTGTTAAATTCTCAGGTCCTTCCTATCATAAGGAACTCATCTAATTATGGAGGCATAATGTTGTGGGACAGATACAGCGATGTTAAGAGCAGATATAGTGATTCCATCAAATTTGATACAGGTGCAGCTCCTCAATGCCCCCTTGTTAGTGCTGAGAACTCTACCTTTAGTAGTGGATATTTCGATTATCTTTCGGTACAATTCTACAACAATCCTCCATGCAATTTTGTGAGTAGCAGTACTAGTGGCTTCATAAATGCATGGCACCAATGGAGCAATTTGAAAGTGAAGAAAATATTTCTGGGGTTGCCAGCATCTTCTGATGAAGCTGCATCTGGCTATATTCCTGCAAATTTGTTAAATTCTCAGGTCCTTCCTATCATAAGGAACTCATCTAATTATGGAGGCATAATGATAGTTATTGGCGTGGGAGCTGCCATTACAATATGTTTAATTTGCTACTTGAGCTGTGTATGTTGGAGGAAGTACAAAGCAGAAGTGGATACAAGAAACAGGCAAAGGAAGCTAATACATGACATTGGAGGTGCTGCAATGCTTTCCAGGATGAATTACATAGCAAAAAAGTTTAAAAGAGAGGCTAATGCAGGCGATGAGATTGAAATATTCAGTTTTGAAAGCATGGTCGCTGCTACAAACAATTTCTCAAGCTCAAATAAGCTTGGTGAAGGAGGATTTGGACCTGTTTATATGGGTAGATTGACAAACCAACAAGAAATTGCGATAAAGCGACTCTCTACAAGTTCGGGTCAAGGGTTAACAGAGTTTAAGAATGAAGCTAAACTCATTGCAAAACTGCAGCACACTAATCTTGTGAAGCTTATAGGGCTCTGCATCCAAAGAGAAGAGAGAATGTTGGTCTATGAGTACATGTCCAACGGAAGCTTAGACTTGCACTTATTTGATTCAGAAAGAAGGAATGTTTTGGATTGGGAAAAGCGGCTTAACATCATAGAAGGCATTGCTCAAGGACTATTATATCTTCACAAGTATTCAAGGCTAAAAGTGATTCATCGTGATTTGAAAGCCGGCAACATATTACTTGACGATGAGATGAAACCTAAGATATCGGATTTTGGCATGGCTAGAATACTAGGACTAACAGGTTCTGAAGAAAAAACAAACCGAATTGTTGGAACACATGGTTACATGTCTCCAGAGTATATGTTAAATGGCGTCGTCTCCCCAAAAGTAGACGTTTTCAGCTTTGGTGTATTGCTGCTAGAGATTCTCAGTGCAAAAAAGAATAACTCCTCTTATAACCCTGATTTTCCACTACTCAATCTCATTGGAAATGCATGGAAGTTATGGAATGAAGGTAAAGCTCTAGAGCTAATGGACCATGGATTAAATGAAACATGCAATCCTAAAGAAGTATTGAGATGTATCCACATTGGCCTATTGTGTGTGCAAAACGTTCCAACAGATAGACCCACCATGGTTGATGTTGTCTCTTTTTTGTCAAATGATGCTATCCAACTTGCTCAGCCAAAGCAGCCAGCATTCTTCATCAATGTTGATACAAACCAACAACAATTGCATACTAACACACAAGAAATTTTCTCCAAAAATAGTTTAACATTATCTGATGTGGATGGCAGATGA 2397 0.3938 MVRVNLHLSYVLLLIYFLFWVLINTTKADDIGVYWGQNSDEGTLANTCESRKYSYVNIAFLTTFGNGETPVLNLEGHCNPSSKGCTGLSLDIKSCQKQGIKVMLSIGGVSSTSQLTSSKDAKNVSDYLWNNFLGGKSSSRPLGDAVLDGIEFNPGDNGYSIYWMDLARYLKSNSTQNVSIGAAPQCPLVSAENSTFSSGYFDYLSVQFYNNPPCNFVSSSTSGFINAWHQWSNLKVKKIFLGLPASSDEAASGYIPANLLNSQVLPIIRNSSNYGGIMLWDRYSDVKSRYSDSIKFDTGAAPQCPLVSAENSTFSSGYFDYLSVQFYNNPPCNFVSSSTSGFINAWHQWSNLKVKKIFLGLPASSDEAASGYIPANLLNSQVLPIIRNSSNYGGIMIVIGVGAAITICLICYLSCVCWRKYKAEVDTRNRQRKLIHDIGGAAMLSRMNYIAKKFKREANAGDEIEIFSFESMVAATNNFSSSNKLGEGGFGPVYMGRLTNQQEIAIKRLSTSSGQGLTEFKNEAKLIAKLQHTNLVKLIGLCIQREERMLVYEYMSNGSLDLHLFDSERRNVLDWEKRLNIIEGIAQGLLYLHKYSRLKVIHRDLKAGNILLDDEMKPKISDFGMARILGLTGSEEKTNRIVGTHGYMSPEYMLNGVVSPKVDVFSFGVLLLEILSAKKNNSSYNPDFPLLNLIGNAWKLWNEGKALELMDHGLNETCNPKEVLRCIHIGLLCVQNVPTDRPTMVDVVSFLSNDAIQLAQPKQPAFFINVDTNQQQLHTNTQEIFSKNSLTLSDVDGR 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00337 798 Gene3D Glycosidases 297 398 - -
Aip09g00337 798 Gene3D Glycosidases 30 296 - -
Aip09g00337 798 Gene3D Transferase(Phosphotransferase) domain 1 555 766 - -
Aip09g00337 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Aip09g00337 798 SMART serkin_6 479 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00337 798 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 301 IPR001223 GO:0005975
Aip09g00337 798 SUPERFAMILY (Trans)glycosidases 300 397 IPR017853 -
Aip09g00337 798 SUPERFAMILY (Trans)glycosidases 27 295 IPR017853 -
Aip09g00337 798 Gene3D Phosphorylase Kinase; domain 1 452 554 - -
Aip09g00337 798 Pfam Protein tyrosine and serine/threonine kinase 482 751 IPR001245 GO:0004672|GO:0006468
Aip09g00337 798 PANTHER OS01G0783800 PROTEIN 348 767 - -
Aip09g00337 798 SUPERFAMILY Protein kinase-like (PK-like) 462 785 IPR011009 -
Aip09g00337 798 ProSiteProfiles Protein kinase domain profile. 479 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00337 798 CDD GH18_hevamine_XipI_class_III 30 295 IPR045321 -
Aip09g00337 798 CDD STKc_IRAK 485 751 - -
Aip09g00337 798 Pfam Glycosyl hydrolases family 18 31 285 IPR001223 GO:0005975
Aip09g00337 798 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 348 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00337 Aip-Chr9 3270236 3291215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00337 467 777 Receptor kinase-like Gene Family AT4G11480 53.376 2.07e-113 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g00337 PK_Tyr_Ser-Thr 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00337 - - adu:107464076 1334.7