Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00323 ATGCCCAAGAAGATTAAAAAATCTCTCAAACATTACATATCCAAGATCAAGAACACTTCTCACCCACAAATTCATTTAGTACCCTCCAAGAAATGGGTTCTCTCAAGTTGCAAGCATCCAAGGACACCTTCTTTTGCCTTGGAAAACAAGAAAAAAGACACCAACAAAGATGAAGAAGCGACCCTAGCAGATGTGGATCGCTTCCTCTTCGAAAATTTCAAGTCACTTTACTTGAAAGACGACGATGAAGAAGCTACCACTGCCACAACCGCCACAAAAAATAAGGAGCATAATAAATCTAAAAAGGTGGCGGAAGAAAAAAGCTATGATGATGAACACAAAGGTATAAAAGTAGGATCTTCTCCTATTTTTTATGATGACATAATTGATCTAGGTGGATCTAATAGATTCTTTATGCCACGTGCACTCTCAGAGTCATATTCGTTTAGGAATACGACTCTGAGAGGTGATGACGATGAAATTATATCAAATTCAACTTCAGTATCAACACATAATAATTCGTCACCATCTTCACAATTATACCATAGTGCAAAAACTTATGTCCAAGGCCATAATCATCACGATCGTGATTATAGTGAACGTGATCATAGGCTTGTGGATAACTGTGTGGCCGTGTTGGCATCTTCGGAGAGCCCTTATGAGGATTTCAAGAATTCCATGCAAGGAATGGTGGATGCAAGGGTAAGGAACAACCAAAGGGTGGATTGGGATTTCATGGAAGAGCTCTTGTTTTGTCATATAAATTTGAATGACAAGAAGTTACACAAGTTCATACTAAGTGCTTTTGTGGAGTTGGTCACTGCCTTGCGCCAGCAGCCGGAGAATAATCCTCCGGCAACGGCTGGGAAGCCACGGAGCGTTCGAACGGTGAGAAGTGGAAATTTGGAAGGGAGGTAA 918 0.4074 MPKKIKKSLKHYISKIKNTSHPQIHLVPSKKWVLSSCKHPRTPSFALENKKKDTNKDEEATLADVDRFLFENFKSLYLKDDDEEATTATTATKNKEHNKSKKVAEEKSYDDEHKGIKVGSSPIFYDDIIDLGGSNRFFMPRALSESYSFRNTTLRGDDDEIISNSTSVSTHNNSSPSSQLYHSAKTYVQGHNHHDRDYSERDHRLVDNCVAVLASSESPYEDFKNSMQGMVDARVRNNQRVDWDFMEELLFCHINLNDKKLHKFILSAFVELVTALRQQPENNPPATAGKPRSVRTVRSGNLEGR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00323 305 Pfam Transcriptional repressor, ovate 216 276 IPR006458 -
Aip09g00323 305 MobiDBLite consensus disorder prediction 280 305 - -
Aip09g00323 305 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 290 - -
Aip09g00323 305 MobiDBLite consensus disorder prediction 86 113 - -
Aip09g00323 305 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 290 IPR038933 GO:0045892
Aip09g00323 305 ProSiteProfiles OVATE domain profile. 212 275 IPR006458 -
Aip09g00323 305 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 210 277 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00323 Aip-Chr9 3083514 3084431 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip09g00323 Ovate 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00323 - - ahf:112709854 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00323 09 3083514 3084431 Aip09g00323 09 3083514 3084431 ECH
Aip08g00141 08 913862 915460 Aip09g00323 09 3083514 3084431 PCT