Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00320 ATGAGCGTGGTGGGTTTTGATTTTGGCAATGAGAGCTGCATCGTTGCAGTTGCAAGGCAGAGGGGAATTGATGTTGTACTTAATGATGAGTCGAAGCGTGAAACACCTGCCATTGTGTGCTTTGGTGACAAGCAACGCTTTATTGGGACTGCTGGGGCTGCATCAACTATGATGAACCCCAAGAATTCTGTCTCACAGATGAAGAGACTCATTGGCAAAAAATTCTCTGATCCTGAATTGCAGCGGGATATCAAGTCTTTGCCTTTTAATGTCACAGAAGGCCCTGATGGATTCCCATTAATTCATGCACGCTACATGGGTGAAGTTAAAACATTTACACCTACTCAAGTATTTGGAATGATGCTGTCAAATCTTAAGGAAATAGCCCAGAAAAATCTCAATGCTGCTGTTGTTGATTGTTGCATTGGAATCCCGGTTTATTTTACTGATATTCAGAGGAGGGCTGTCTTGGATGCAGCCACTATTGCTGGTCTGCATCCGCTTCGCCTGTTCCATGAAACAACTGCAACTGCCTTGGCTTATGGGATTTACAAGACCGATCTTCCTGAGAATGATCAGCTGAATGTTGCTTTTGTCGACATTGGACATGCTAGCATGCAAGTGTGCATTGCTGGCTTCAAAAAGGGACAGCTGAAAGTATTGGCTCACTCCTATGACAGGTCTCTGGGTGGTAGGGATTTTGATGAGGTTCTGTTCCATCACTTTGCCGAAAAATTTAAGACGGAGTACAAAATTGATGTTTTCCAGAATGCCCGGGCTTGTTTGAGGCTTAGGGCTGCTTGTGAGAAGCTGAAGAAGGTGCTTAGTGCAAATCCCGAGGCACCTCTGAATATTGAATGCTTAATGGATGAGAAGGATGTCAGAGGCTTCATCAAGCGCGATGAGTTTGAGCAACTAAGTCTCCCAATTTTGGAACGTGTGAAGGGACCTTTGGAGAAGGCACTAGCTGAAGCAGCTCTTACAATTGAAAATGTTCACATGGTTGAGGTGGTTGGTTCAGGATCTCGTGTACCAGCTATAAATAAAATATTGACAGATTTCTTCAAAAAGGAGCCTAGACGAACAATGAATGCTAGTGAGTGTGTTGCTAAGGGTTGTGCCTTGCAATGTGCAATTCTTAGTCCAACTTTTAAAGTACGAGAGTTTCAGGTCAATGAAAGTTTTCCTTTTGCAATTTCCCTTTCATGGAAAGGTTCTGGACCAGATGCACAGGGAAATATTGGATCAGATAATCAGCAAAGTAGCCTTGTTTTCCCCAAGGGCAATCCCATTCCAAGTATTAAGGCATTGACATTCTACAGGCCAGGAACATTCTCTATTGATGTACAATATAGTGATGTGAGTGAACTGCAAACACCTGCCAAGATCAGTACATATACTATTGGTCCGTTCCAAACTACAAAAACTGAAAGAGCAAAAGTTAAAGTGAGAGTTCGTTTGAATTTGCATGGAATCGTATCTATTGATTCAGCAACTCTATTGGAAGAGGAAGAAGTTGACGTTCCGGTTTCCAAAGAATCAGCTGCAGAAAACACCAAGATGGATACTGATGAATCCCCTGCTGATGGTGCTGCTCCTCCAACCTCCAATGACACTGATGTTAACATGCAAGATGCGAAGGCTAATACTGATACCACTGGGCCTGAAAATGGTAGCCCTGAGACTGGAGAAAAGCCTGTTCAAATTGACACCGATACTAAGGCTCCGAAGAAAAAGGTTAAGAAAGCAAATATTCCTGTAGCAGAGGTGGTTTATGGAGCTATGGAACAAGTGGATCTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGCGTGATGGAAGAAACAAAAGACAAGAAAAATGCCGTTGAGGCTTATGTTTATGAAATGCGGAACAAGCTTAATGACAAATATCAAGATTTTGTCACTGCTCCAGAGAGGGAAGATTTTACTGCTAGACTTCAGCAGGTGGAAGACTGGCTATATGAGGATGGTGAAGACGAAACTAAAGGCGTATATATTGCGAAACTTGAAGAACTTAAAAAGCAAGGTGATCCTATTGAAGCTCGTTATAAAGAACACACGGAGAGGGGCACAGTAATTGATCAGCTCAACTATTGTATAAATAGTTACAGAGAAGCTGCAATGTCAAGTGATCCCAAATTTGATCACATTGACATCAATGAGAAGCAGAAGGTAGTCCTAAATGAGTGTGTTGAGGCTGAAAACTGGCTTAGGGAGAAAACGCAACAGCNNNNNNNNNNNNNNNNATTTGATTTATTTCTTGTTATGCTTTGCTGTCTTCCAGTTTGTAAAACAAACATCTTGGACACCAAGCCAGCTACTCCCCCAGCACAAGCAACAACCCCACCACAGGGTGGTGAGCAGCAGCAACCTCAGGGTGGTGCAAGTGCCAACACTAATGAGAATTCACGGAACGATGGTAGTGACATCCCACAAGAATCGATGGAGACCGAGAATAAACCATAG 2502 0.4269 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSVSQMKRLIGKKFSDPELQRDIKSLPFNVTEGPDGFPLIHARYMGEVKTFTPTQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDIQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSYDRSLGGRDFDEVLFHHFAEKFKTEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAALTIENVHMVEVVGSGSRVPAINKILTDFFKKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNESFPFAISLSWKGSGPDAQGNIGSDNQQSSLVFPKGNPIPSIKALTFYRPGTFSIDVQYSDVSELQTPAKISTYTIGPFQTTKTERAKVKVRVRLNLHGIVSIDSATLLEEEEVDVPVSKESAAENTKMDTDESPADGAAPPTSNDTDVNMQDAKANTDTTGPENGSPETGEKPVQIDTDTKAPKKKVKKANIPVAEVVYGAMEQVDLQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYEMRNKLNDKYQDFVTAPEREDFTARLQQVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEARYKEHTERGTVIDQLNYCINSYREAAMSSDPKFDHIDINEKQKVVLNECVEAENWLREKTQQXXXXXXFDLFLVMLCCLPVCKTNILDTKPATPPAQATTPPQGGEQQQPQGGASANTNENSRNDGSDIPQESMETENKP 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00320 833 Gene3D - 5 374 - -
Aip09g00320 833 Gene3D - 38 113 - -
Aip09g00320 833 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 597 695 IPR029048 -
Aip09g00320 833 CDD HSPA4_like_NDB 2 381 - -
Aip09g00320 833 PANTHER HSC70CB, ISOFORM G-RELATED 1 830 - -
Aip09g00320 833 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Aip09g00320 833 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Aip09g00320 833 Gene3D - 595 705 IPR029048 -
Aip09g00320 833 MobiDBLite consensus disorder prediction 506 574 - -
Aip09g00320 833 Gene3D - 186 360 - -
Aip09g00320 833 MobiDBLite consensus disorder prediction 530 559 - -
Aip09g00320 833 PRINTS 70kDa heat shock protein signature 30 42 - -
Aip09g00320 833 PRINTS 70kDa heat shock protein signature 363 383 - -
Aip09g00320 833 PRINTS 70kDa heat shock protein signature 140 160 - -
Aip09g00320 833 PRINTS 70kDa heat shock protein signature 2 15 - -
Aip09g00320 833 PRINTS 70kDa heat shock protein signature 332 348 - -
Aip09g00320 833 MobiDBLite consensus disorder prediction 783 822 - -
Aip09g00320 833 Pfam Hsp70 protein 3 695 IPR013126 GO:0005524|GO:0140662
Aip09g00320 833 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 593 IPR029047 -
Aip09g00320 833 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 628 IPR029047 -
Aip09g00320 833 MobiDBLite consensus disorder prediction 782 833 - -
Aip09g00320 833 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 830 - -
Aip09g00320 833 MobiDBLite consensus disorder prediction 506 524 - -
Aip09g00320 833 Gene3D Actin; Chain A, domain 4 230 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00320 Aip-Chr9 3060157 3064134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00320 4 406 Calmodulin-binding Proteins AT1G16030 37.192 3.11e-86 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00320 K09489 - gmx:100778196 1300.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00320 09 3060157 3064134 Aip09g00320 09 3060157 3064134 ECH
Aip08g00138 08 892725 898308 Aip09g00320 09 3060157 3064134 PCT