Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00313 ATGGGCGTGAATTCCACCACCACCGTCAACAAAATCCAATCGGAGTTACCGATCTCAGTGGCATCTCCGCCGTTGGAGATCCACAACGTGCGGTTGCCGCCACGGCGAAGCACCTCACAGAAGCTAAGGCAGAGGCTCTCAGACATATTCTTCCCGGACGATCCACTTCACCGGTTCAAGAACCAACCGTCATGGTTGGTGAAGCTCATGCTCGGTGTTCAGTGCATGTTCCCTATCTTCCAGTGGGGCCCAACCTATAACCTTTCCCTTTTTCGTTCTGACGTCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGCAGGGAATCAGCTATGCTAAGCTTGCAAACCTGCCACCTATTATTGGATTATATTCAAGTTTTGTGCCACCATTGATATATTCCCTGCTTGGAAGCTCTAAACATCTTGGAGTTGGTCCAGTCTCAATTGCATCTTTGGTGATGGGATCAATGTTAAGTGAAACAGTTTCTTACACACAAGATCCAATTCTTTATCTCAAATTGGCTTTCACTGCCACTTTCTTTGCTGGTGTCTTCCAATCTTCTTTGGGAATATTAAGGTTAGGATTTGTGATTGATTTTCTGTCAAAGGCAACACTGGTAGGATTCATGGCTGGTGCAGCCATAATTGTATCTTTGCAGCAGCTGAAAGGGTTGCTTGGAATAGTGCACTTCACCAGCAAGATGCAAATAATTCCAGTATTAGCCTCGGTTTTCAAACAAAAAGACGAGTGGTCATGGCAAACTATTGTACTGGGATTTGGCTTCTTGGCCTTCCTCCTGATAACAAGACACATTAGCTTAAGGAAGCCAAACTTATTCTGGGTTTCAGCAGCTGCTCCATTGGCATCAGTTATTCTTTCAACAATTTTAGTCTTTCTCCTAAGAAACAAGGCTCATGGAATTGCAATTATTGGTGAATTGCCAAAAGGCCTTAATCCACCATCATCAAACATGTTATTCTTTAGTGGCCCTTATTTGGCTCTTGCTATCAAAACTGGAATTGTTACTGGGATCTTGTCTCTAACTGAAGGAATTGCAGTTGGAAGAACATTTGCTGCACTTAAGAATTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTATCATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCGCGATCGGCTGTTAACTATAATGCTGGAGCACAGACAGCAGTCTCAAATATAATCATGGCTTCAGCAGTTCTTGTGACTCTTCTGTTTCTAATGCCACTATTCTATTACACGCCAAACGTCGTCTTAGCAGCGATTATCATCACTGCTGTGATTGGCCTAATAGATTACCAAGCTTCATATAAGCTATGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCATGTGCTCCTTTTTCGGAGTTCTGTTCATCTCAGTGCCTTTAGGCCTTAGTATTGCGGTGGCAATATCAGTGTTCAAGATATTGCTTCATGTCTCAAGACCAAACACATTGGTGTTGGGGAATATACCAGGGACAACAATATTCCACAATGTAAACCAGTATAGAGAAGCTCTTAGAATCCCTTCATTCCTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACTTACCTTCAAGAAAGGATTTTGAGATGGGTTAGAGAAGAGGAAGAGCATATCAAAGCAAACAATGGAAGTAAATTGGAGTGCATAATTTTGGACATGACAGCTGTGACAGCCATAGACACAAGTGGGATAGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAAAGATCACTTCAGCTGGTGTTGGCAAATCCAGTTGGAAGTGTCATGGAAAAGTTGCATCAATCAAACATTTTGGATTCCTTTGGTTTGAAAGGAGTGTATCTCACAGTTGCTGAAGCTGTGGCTGACATTTCATCCTCTTGGAAAGCACAACCTTGA 1965 0.4295 MGVNSTTTVNKIQSELPISVASPPLEIHNVRLPPRRSTSQKLRQRLSDIFFPDDPLHRFKNQPSWLVKLMLGVQCMFPIFQWGPTYNLSLFRSDVISGLTIASLAIPQQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSETVSYTQDPILYLKLAFTATFFAGVFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTSKMQIIPVLASVFKQKDEWSWQTIVLGFGFLAFLLITRHISLRKPNLFWVSAAAPLASVILSTILVFLLRNKAHGIAIIGELPKGLNPPSSNMLFFSGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGIMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQASYKLWKVDKLDFLACMCSFFGVLFISVPLGLSIAVAISVFKILLHVSRPNTLVLGNIPGTTIFHNVNQYREALRIPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANNGSKLECIILDMTAVTAIDTSGIDTLCELRKMLEKRSLQLVLANPVGSVMEKLHQSNILDSFGLKGVYLTVAEAVADISSSWKAQP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00313 654 PANTHER SULFATE TRANSPORTER 16 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip09g00313 654 ProSiteProfiles STAS domain profile. 523 646 IPR002645 -
Aip09g00313 654 Pfam Sulfate permease family 91 472 IPR011547 GO:0016021
Aip09g00313 654 Gene3D STAS domain 503 648 IPR036513 -
Aip09g00313 654 PANTHER SLC26A/SULP TRANSPORTER-RELATED 16 654 - -
Aip09g00313 654 SUPERFAMILY SpoIIaa-like 528 645 IPR036513 -
Aip09g00313 654 CDD STAS_SulP_like_sulfate_transporter 524 639 - -
Aip09g00313 654 TIGRFAM sulP: sulfate permease 78 642 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip09g00313 654 Pfam STAS domain 524 642 IPR002645 -
Aip09g00313 654 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00313 Aip-Chr9 3024009 3028281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00313 25 654 Inorganic Solute Cotransporters AT3G15990 77.215 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00313 K17471 - gmx:100780331 1112.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00313 09 3024009 3028281 Aip09g00313 09 3024009 3028281 ECH
Aip08g00132 08 871939 876910 Aip09g00313 09 3024009 3028281 PCT