Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00296 ATGGGAAATATTGGTAATGTTATAAATGGGCTTAAGCCTGCAATTGGGATGATAATTGTTCAAGTTGCTTATGCTGGTCTTAGTATTTTATACAAATTGGTTGTAGAAGATGGTATGAACATGAGTGTACTCATTGCCTATAGAACCCTATTTGCAACATCTTTTGTTGTTCCTCTTGCATTCTTCATGGAAAGGAAGAGCAAGCCAAAAATTACACCAGATGTTCTCTTTCAATCATTCCTTTGTGGATTATTTGGGGTAACTTTACAACAAAATCTGTATGTGAGGGCAGTGGCATTTGCATCAGCAACATATGCTTCAACCATGACCAACCTTATTCCTGGTGTGACCTTCATCCTAGCCCTCTGTTTTGGATTAGAAAGGTTGAAGATTAGAACATTAACAGGGAAGGCTAAGGTTATTGGCACTATAATGGGGATTGGTGGAGTCATGATCATCACATTCTATAAGACCAAAGAGATTCACATTTGGCCTACACATCATGTCAATATGATCAAGCACAACCAATCACACATTTCTCCTACTAATCAAGTTTTGGGCTCTGCTTTTGGTTTTGGAAATTGTTTATGCTATTCTATGTGGTTGATCCTTCAGGCTAAGATGAGTGAAAAATTCCCCTGGCAATATTCAAGTGCAGCATTGGTGTCAGCAATGGCATGTATTCAAGTAATTATATTTGCACTTTGCATGGAAAGAAATTGGAATCAATGGAAGCTTGGTTGGAATATCAAACTCCTCAGTGTAGCTTATACGGGAATAGTGGCATCTGGAATAGCTTTGGTTCTGATTTCATGGTGTGTGAGATTAAGAGGTCCACTTTATGCTTCTACTTTCAACCCTCTTTCTCTTGTCATAGTTACCATTGCAGCCTCTTTAATTTTGGATGAAAGACTCTATGTGGGAAGCATAATAGGTTCAATATTAGTAGTGTTGGGGCTATACACTGTCTTGTGGGGTAAAGGCAAAGAATATGAGAACATGGCAAAGGAGAAGCTTACAAAAGTAGTCTCAACCAATGGCCAAACATTGAAGATTATTATCACAACAAATAATCATAGTGATAATAATATTAATAATGGAATTGACATGAAGTTATCAAGAGAAGGACAACAACAAAATGGAGTTAAAGATTGTTCAAGTAACAAAGGAAACCAAGGAAATGAAGGAAAGGTAACCCCATTGAACAATGAGGACTCAAAACCTAGTACCTAG 1233 0.3739 MGNIGNVINGLKPAIGMIIVQVAYAGLSILYKLVVEDGMNMSVLIAYRTLFATSFVVPLAFFMERKSKPKITPDVLFQSFLCGLFGVTLQQNLYVRAVAFASATYASTMTNLIPGVTFILALCFGLERLKIRTLTGKAKVIGTIMGIGGVMIITFYKTKEIHIWPTHHVNMIKHNQSHISPTNQVLGSAFGFGNCLCYSMWLILQAKMSEKFPWQYSSAALVSAMACIQVIIFALCMERNWNQWKLGWNIKLLSVAYTGIVASGIALVLISWCVRLRGPLYASTFNPLSLVIVTIAASLILDERLYVGSIIGSILVVLGLYTVLWGKGKEYENMAKEKLTKVVSTNGQTLKIIITTNNHSDNNINNGIDMKLSREGQQQNGVKDCSSNKGNQGNEGKVTPLNNEDSKPST 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00296 410 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016021|GO:0022857
Aip09g00296 410 MobiDBLite consensus disorder prediction 375 410 - -
Aip09g00296 410 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020|GO:0016021
Aip09g00296 410 Pfam EamA-like transporter family 187 324 IPR000620 GO:0016020|GO:0016021
Aip09g00296 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 329 - -
Aip09g00296 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Aip09g00296 410 PANTHER WAT1-RELATED PROTEIN 12 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00296 Aip-Chr9 2898065 2902638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00296 1 363 Nodulin-like Gene Family AT1G68170 38.965 1.02e-87 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00296 - - aprc:113856022 479.559