Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00281 ATGAAAGAAAATAGTGTCACTTTGAAAGCTGGAGAGCTCCCTTGTCGATTGACTCGTGCTCGAGCTGCTGCATTTCGTGCATCAGGACAGCTTCCACCACTGAAGGAACCAGCAAAGCAGAAGAATCAGAAGCAGCCGCAGCTGCGAGCCAATCCAAAAAGAGCAGTTTCTGATAATGCTTGTCTTCAGCGCAAGAAGAGAGCTGTTCTTCAGGATGTTACTAATGTTTTCTGTGAGAATACATACAGGAGCTGTTTCAATTCAACTAAAATTCAGGGTAAGAAGAGCAAGCTGGCAAAGGCTAGTCGAATCAATGTTTCCAAAGTGGCGCCTTCTGCTGCTGCGCAGCAACATGTTCGAGTTCACTGCAAAACAAAGAGTTTTCCGGAGCCAGGTCTTAAATCAGAAGATGCATCTTGTTCAATTAATTCAGAAAACAATGCACTCATTAGGCTAAGTGTGAAAGAGAGTGGCAAGGATGATAAAACTCATGTATCAGGAATCTCTCCTCTGCCTTTGATTTCGCAGAAGAAAGCCAAGAAGTGTAGCCCTTTTCCAATTGCATTAAGGGATCCAGAGATTGCTAACATAGATGATGATAATGAAGATCCTCAGTTGTGCAGCCTCTATGCTGCTGATATCTATAACACCTTGCGAGTTTATGAGCTCGCAAGAAGGCCGAATCCTAACTTTATGGACACAAAGCAGCACGACATCACTCAAAGCATGCGCGGGATACTGGTCGATTGGCTTGTAGAGGTTTCTGAGGAATACAGATTGGGACTAGACACTCTTTATCTCACTGTGTATCTCATAGATTGGTTTCTCTCCAGAAATTACATAGAAAGACAGAGACTTCAGCTACTTGGGATCACATGCATGTTAATCGCCTCGAAGTATGAAGAAATTAATGCCCCACGAATCGAAGATTTTTGCTACATCACAGACAACACATACACGAAAGCAGAGGTACTGAAAATGGAGAGCCAAGTGTTGAAATCTTCTGGATATCAGCTTTTTGCTCCCACTACAATAAGTTTCCTCAGGAGGTTTCTTCAAGCTGCTCAAGCATCATCTAAGAGTCCGAGCCTTGAATTGGAGTACTTGGCCAACTATCTAGCTGAACTAACATTGATGGAATATAGTTTCTTGAATTTCCTTCCATCTACCATTGCTGCATCAGCTGTGTTCCTTGCCAAATGGACATTGGATCAGTCAAAACATCCATGGAGTCCAACTCTTCAGCACTATGCTTGTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCATTACAAGATCTGCAGTTGAATATCAATGGATGCCCTCTAACTGCGATTCGCTCGAAGTACAGTCAAGACAAGTTTAAATATGTAGGGTCCTTGTCTCCACCAAAACTACCTGAAACTATGTTCTGA 1419 0.4264 MKENSVTLKAGELPCRLTRARAAAFRASGQLPPLKEPAKQKNQKQPQLRANPKRAVSDNACLQRKKRAVLQDVTNVFCENTYRSCFNSTKIQGKKSKLAKASRINVSKVAPSAAAQQHVRVHCKTKSFPEPGLKSEDASCSINSENNALIRLSVKESGKDDKTHVSGISPLPLISQKKAKKCSPFPIALRDPEIANIDDDNEDPQLCSLYAADIYNTLRVYELARRPNPNFMDTKQHDITQSMRGILVDWLVEVSEEYRLGLDTLYLTVYLIDWFLSRNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCYITDNTYTKAEVLKMESQVLKSSGYQLFAPTTISFLRRFLQAAQASSKSPSLELEYLANYLAELTLMEYSFLNFLPSTIAASAVFLAKWTLDQSKHPWSPTLQHYACYKASDLKTTVLALQDLQLNINGCPLTAIRSKYSQDKFKYVGSLSPPKLPETMF 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00281 472 SUPERFAMILY Cyclin-like 342 466 IPR036915 -
Aip09g00281 472 CDD CYCLIN 342 432 IPR013763 -
Aip09g00281 472 PIRSF Cyclin_A_B_D_E 17 471 IPR039361 -
Aip09g00281 472 Pfam Cyclin, N-terminal domain 213 334 IPR006671 -
Aip09g00281 472 Gene3D - 227 340 - -
Aip09g00281 472 CDD CYCLIN 243 332 IPR013763 -
Aip09g00281 472 PANTHER CYCLINS 46 472 IPR039361 -
Aip09g00281 472 SUPERFAMILY Cyclin-like 202 338 IPR036915 -
Aip09g00281 472 Gene3D - 213 460 - -
Aip09g00281 472 MobiDBLite consensus disorder prediction 27 56 - -
Aip09g00281 472 Pfam Cyclin, C-terminal domain 342 464 IPR004367 -
Aip09g00281 472 SMART cyclin_7 346 434 IPR013763 -
Aip09g00281 472 SMART cyclin_7 249 333 IPR013763 -
Aip09g00281 472 PANTHER CYCLIN-A2-4 46 472 - -
Aip09g00281 472 SMART Cyclin_C_2 342 465 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00281 Aip-Chr9 2656020 2661449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00281 2 472 Core Cell Cycle Gene Families AT1G80370 54.123 1.04e-159 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00281 K06627 - gmx:100793657 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00281 09 2656020 2661449 Aip09g00281 09 2656020 2661449 ECH