Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00276 ATGGGAACCGAAACCCCTCTAAAGCTTCCTACCATTGACTTCAATGACCTAAACATGGATGATAGTAATAATAATTGTAAGTGGGAGGAAGTGAAATCAAAAGTGCACAATGCATTAATAGAGTATGGTTGCTTTGAAGCAATATTTGATAAAGTTCCTTTAGAACTTTGCAAAGATTTGTTTCCTTCACTAGAAGAGCTCTTTGATCTCCCTATACAAACCAAGAAACTCAATGCATCTAAGAAGCCCTATCATGGATATGTTGGCCAATTTCCAATGGTGCCACTTTATGAAAGCATGGGAATAGATGATGCAAATGTTCTTGAGAAAGTTGAAGCCATGACCAACATCTTGTGGCCTAATGGAAACCCAAATTTCAGCAAAACTATTCATTGCTTCTCTGAAAAGCTATCAGAGTTGGATAAGATTATTAGGAAGATGGTTTTGGAGAGCTTGGGAGTTGAGAAGTACTTAGAGGAGCACATGAACTCAACCAATTACCTTATTAGGGTTATGAAATACAAAGGCCCTCAAACAAGTGAGACAAAGCTAGGCCTCAGCTCTCACACAGACAAGAATGTTGTTACCATTTTGTGCCAAAATCAAGTTGATGGCTTAGAGATTTTGACTAAAGATGGAAAATGGATAAGCTTCAAGCCCTCCCAACCTGGCACCTTCATTGCTATGATTGGTGATGCCCTCCATTCATGGTCAAATGGGAGGCTCCATTCAGCTTTTCACAGGGTGATGATGAGTGGGAATGAAGCAAGATACTCTGCAGGGTTGTTCTCTATACCAAATGGTGGGTACCTTATAAAAGCACCACAAGAGATGGTTGATGATGATCACCCTCTTCTCTTTAAGCCTTATGATCATGTTCACTTCCTCAACTATTATTACTCTCCACAAGGCCAGACAGATCAATTTGCTCTACGCACTTATTGTGGTCTTTAA 954 0.3983 MGTETPLKLPTIDFNDLNMDDSNNNCKWEEVKSKVHNALIEYGCFEAIFDKVPLELCKDLFPSLEELFDLPIQTKKLNASKKPYHGYVGQFPMVPLYESMGIDDANVLEKVEAMTNILWPNGNPNFSKTIHCFSEKLSELDKIIRKMVLESLGVEKYLEEHMNSTNYLIRVMKYKGPQTSETKLGLSSHTDKNVVTILCQNQVDGLEILTKDGKWISFKPSQPGTFIAMIGDALHSWSNGRLHSAFHRVMMSGNEARYSAGLFSIPNGGYLIKAPQEMVDDDHPLLFKPYDHVHFLNYYYSPQGQTDQFALRTYCGL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00276 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 266 IPR005123 -
Aip09g00276 317 Gene3D - 7 314 IPR027443 -
Aip09g00276 317 SUPERFAMILY Clavaminate synthase-like 6 301 - -
Aip09g00276 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 89 IPR026992 -
Aip09g00276 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 316 - -
Aip09g00276 317 Pfam 2OG-Fe(II) oxygenase superfamily 161 263 IPR044861 -
Aip09g00276 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 5 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00276 Aip-Chr9 2553928 2556812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00276 7 284 Glycosyltransferase AT5G59530 25.694 2.08e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00276 - - gmx:100784444 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00276 09 2553928 2556812 Aip09g00276 09 2553928 2556812 ECH
Aip09g00276 09 2553928 2556812 Aip04g02791 04 118907731 118909714 ECH
Aip03g03170 03 102347604 102354138 Aip09g00276 09 2553928 2556812 ECH