Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00217 ATGGCTCTTTGGTTATGCTGCGGAAATGGCAAGAAACGAGGGAAAGAACACGCGACGTGGCGTGTGTTTTCTTTGAAGGAATTACAGTCTGCTACAAATAATTTCAATTATGATAACAAGCTTGGAGAAGGGGGCTTTGGCAGTGTGTATTGGGGCCAACTTTGGGACGGATCGCAAATTGCAGTCAAGAGATTGAAAGTTTGGAGCAACAAAGCTGACATGGAATTTGCTGTTGAAGTTGAAATATTGGCAAGAGTTCGGCACAGGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGGCAGGAACGGTTGATTGTATATGATTATATGCCGAATCTGAGTTTGCTCTCTCATCTTCATGGATCGCACTCGTCAGAATGCCTTCTTGATTGGAAACGGCGGATGGATATTGCAATTGGATCCGCTGAGGGGATTGTATATCTTCACCACCAAGCAACACCGCATATCATCCATAGGGATATCAAGGCAAGCAACGTGTTGCTAGACTCGGATTTCCAGGCCCGGGTTGCTGATTTTGGTTTTGCTAAGTTGATACCTGATGGTGCAACGCACGTGACTACAAAAGTTAAGGGTACCCTCGGATACCTCGCCCCAGAATACGCCATGTTAGGCAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGTATTCTCCTTCTAGAACTTGCTAGTGGCAAGAAACCAATTGAAAAGCTTAGTTCAGCAGTTAAGCGGCCAATAGTTGATTGGGCACTGCCATTGGTATGCGAAAGGAAATTTAGCGAACTCGCTGATCCACGACTAAACGGTGAGTATGTGGAGGAAGAGCTTAAAAGGGTTGTTTTTACTGCGCTGATATGCGCTCAAAATCAACCCGAGAAGAGACCTACCATGCTTGATGTCGTTGAACTGCTAAAGGGAGAATCTAAAGACAAAATTTCTCAGATAGAGAATAGTGAATTGTTCAAAAGCCATCCAGCCGTAGAAAACAGTGATCCAAAATCTGCGGCTGAAGATGACGGTTCAGACTTAATCTTGGAGGTAAAAGAATCAAAACATGACTTGAAAGAGAATACCGGTGAATGA 1089 0.4399 MALWLCCGNGKKRGKEHATWRVFSLKELQSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHRNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGSHSSECLLDWKRRMDIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPIEKLSSAVKRPIVDWALPLVCERKFSELADPRLNGEYVEEELKRVVFTALICAQNQPEKRPTMLDVVELLKGESKDKISQIENSELFKSHPAVENSDPKSAAEDDGSDLILEVKESKHDLKENTGE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00217 362 SMART serkin_6 35 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00217 362 PANTHER OS01G0253100 PROTEIN 4 338 IPR045271 GO:0004714|GO:0006468
Aip09g00217 362 MobiDBLite consensus disorder prediction 333 362 - -
Aip09g00217 362 CDD STKc_IRAK 41 308 - -
Aip09g00217 362 ProSiteProfiles Protein kinase domain profile. 35 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00217 362 MobiDBLite consensus disorder prediction 317 362 - -
Aip09g00217 362 SUPERFAMILY Protein kinase-like (PK-like) 18 306 IPR011009 -
Aip09g00217 362 PANTHER - 4 338 - -
Aip09g00217 362 Pfam Protein tyrosine and serine/threonine kinase 37 306 IPR001245 GO:0004672|GO:0006468
Aip09g00217 362 ProSitePatterns Protein kinases ATP-binding region signature. 41 63 IPR017441 GO:0005524
Aip09g00217 362 Gene3D Transferase(Phosphotransferase) domain 1 111 324 - -
Aip09g00217 362 Gene3D Phosphorylase Kinase; domain 1 9 110 - -
Aip09g00217 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00217 Aip-Chr9 1902923 1906287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00217 23 309 Trihelix Transcription Factor Family AT1G70460 50.859 5.27e-95 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Aip09g00217 PK_Tyr_Ser-Thr 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00217 - - gmx:100788153 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00217 09 1902923 1906287 Aip09g00217 09 1902923 1906287 ECH
Aip08g00064 08 392054 393735 Aip09g00217 09 1902923 1906287 PCT