Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00196 ATGGGAGAGGCTATTCTGTCGGAGCTCGCGACGGAGATAGTGATTCCGGTATGCGCCGTCGTCGGGATCGTGTTCTCACTGGTGCAGTGGTTCCTCGTTTCAAAGGTGAAGCTCACACCGCACGCAACGTCGTCTTCGAGCGGTAACAGTAACAACAACAACTCATCGAAGAGGAGGAAGGAATTAACGACCATAGCGTCGTGGTCAAGTGTGCCGACATTCAAAGCGCCATCTCCGAAGTCCTTTGCAACTGCAACCGCAACCAAACTAAACAAACCTTCGAGCTCAAACTCTTCCATTCCCTTAGTACCATTCAATCTCATCATGCCTCAAACTAACTGGGAGGCTGATAAGATGTTAGATGTTTACATCCATGATTACCTTGTGAAGAGGGACTTGAAGGCTTCAGCTCAGGCTTTTCAAGCTGGGAAAGTATACTCGGACCCCGTTGCTATCGATGCTCCCCGAGGATTTCTATTCGAGTGGTGGTCGGTTTTCTGGGACATATTTATTGCCAGGACTAATGAGAAGCACTCAGAGGTTGCCGCCTCATATATTGAGGGAAGGTCTTTTTGA 576 0.4878 MGEAILSELATEIVIPVCAVVGIVFSLVQWFLVSKVKLTPHATSSSSGNSNNNNSSKRRKELTTIASWSSVPTFKAPSPKSFATATATKLNKPSSSNSSIPLVPFNLIMPQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAGKVYSDPVAIDAPRGFLFEWWSVFWDIFIARTNEKHSEVAASYIEGRSF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00196 191 PANTHER TRANSCRIPTIONAL COREPRESSOR LEUNIG-LIKE PROTEIN 109 188 - -
Aip09g00196 191 Pfam LisH 118 141 IPR006594 GO:0005515
Aip09g00196 191 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 109 188 IPR044716 GO:0003714
Aip09g00196 191 MobiDBLite consensus disorder prediction 40 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00196 Aip-Chr9 1720620 1723449 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00196 4 52 Primary Pumps ATPases AT1G15690 61.224 6.37e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Aip09g00196 LisH 2.4e-06 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00196 - - qlo:115969864 154.451