Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00185 ATGGAGGAGTCAGGGGAAAATTGGCCTTCGGATTCTGATTTGGAAATGGGTGATGATGACAATAATAATGATTATTGTTATGATGATGAAGAAGAATTGGGTTGTGATGAAGAGATTCAATATTTTGCTGAAGAAGAAGCTTTAGATCCTATTATGGATGAGACCCAAAGGAAGAAGAAACAAAGGGAACTTGAAGAGAGATTGCTTGCACTTTCAGCCACCATACCCAGTAGTGGCTTCAAGAATAACAAGATGGACGATAGATCAATCCTTGACAATGCTAGCAACTACGTGAAACAACTCCAACAACGTGTGAGGGAGCTAGAACAAGAAGTTGGTGGTGGATCCAACAACAACAAAGGTGGTGGCAATAATATTAATCTTCCTGAGGTCAAAGTAAGAGTGTTGCAAAACGAAGTGCTCATCATAATCCATTGTGAGAAACAAAAGGGTTTGATGCTCAAAATTCTAACAAAGCTTGAGAATCTTCATCTTTCGGTTCTCAATAACAGTGTCTTGCCATTTGGGAAATCAACCCTCGACATAACCATTGTTGCTCAGGTAATTAACCATTATTATTAA 582 0.3866 MEESGENWPSDSDLEMGDDDNNNDYCYDDEEELGCDEEIQYFAEEEALDPIMDETQRKKKQRELEERLLALSATIPSSGFKNNKMDDRSILDNASNYVKQLQQRVRELEQEVGGGSNNNKGGGNNINLPEVKVRVLQNEVLIIIHCEKQKGLMLKILTKLENLHLSVLNNSVLPFGKSTLDITIVAQVINHYY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00185 193 PANTHER PROTEIN, PUTATIVE-RELATED 47 192 - -
Aip09g00185 193 MobiDBLite consensus disorder prediction 1 30 - -
Aip09g00185 193 Gene3D - 53 118 IPR036638 GO:0046983
Aip09g00185 193 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 58 114 IPR036638 GO:0046983
Aip09g00185 193 Coils Coil 91 118 - -
Aip09g00185 193 PANTHER BHLH TRANSCRIPTION FACTOR 47 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00185 Aip-Chr9 1565657 1568244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00185 58 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 38.509 1.89e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00185 - - aip:107616596 304.679