Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00179 ATGGCAATGGCAGCTTCTGCAGCAAAGAAGAAAATATGCGTAACTGGTGCAGGAGGTTTCTTAGCTTCTTGGGTTGTTAAGTTTCTTCTTTCCAAAGGATACATCGTTCATGGCACTGTTAGACAACCTGGTGATGAGAAATATGCTCACTTGATGAAGCTTGAGGGAGCTTCTGAGAATCTTAAACTCTTCAAAGCAGATTTGTTGAGTTATGAATCAGTTCAGTCAGCAATTGCTGGATGCAATGCTGTTTTCCATGTTGCTTGCCCTGTGCCTTCAACAACATCAACCAACCCTGAGGTAGAAATGATTGAGCCCGCCGTCAAGGGAACTACCAATGTGCTTGAAGCTTCTCTTGAAGCTAAAGTGGAACGAGTCGTCTATGTGTCATCTGTAGCCGCTGCTTTCATGAACCCAAATTTTCCAAATGACAAAGTGATTGATGAATCTTGTTGGTCTGATAAAGACTATTGCAGAAAATCCAATAACTGGTATTGCTTCTCCAAGACAGAGGCTGAAGAGCAGGCCCTAGACTTTGCGAAAAGAACCGGGCTTGATGTGGTGAGCATTTGTCCTACCCTTGTGCTTGGACCCATTTTAAGGTCATCTATTGTGAATGCAAGTAGCTTGGTTCTCCTCAAGATTTTGAAAGGTGCTTAA 660 0.4303 MAMAASAAKKKICVTGAGGFLASWVVKFLLSKGYIVHGTVRQPGDEKYAHLMKLEGASENLKLFKADLLSYESVQSAIAGCNAVFHVACPVPSTTSTNPEVEMIEPAVKGTTNVLEASLEAKVERVVYVSSVAAAFMNPNFPNDKVIDESCWSDKDYCRKSNNWYCFSKTEAEEQALDFAKRTGLDVVSICPTLVLGPILRSSIVNASSLVLLKILKGA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00179 219 Pfam NAD dependent epimerase/dehydratase family 12 199 IPR001509 -
Aip09g00179 219 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 218 - -
Aip09g00179 219 CDD FR_SDR_e 13 219 - -
Aip09g00179 219 Gene3D - 2 219 - -
Aip09g00179 219 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 7 218 - -
Aip09g00179 219 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 218 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00179 Aip-Chr9 1500259 1501718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00179 5 207 Monolignol Biosynthesis Gene Families AT2G33590 68.473 2.93e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00179 - - lja:Lj3g3v2171530.3 340.502