Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00178 ATGGCAATGGCAGCTTCTGCAGCAAAGAAGAAAATATGCGTAACTGGTGCAGGAGGTTTCTTAGCTTCTTGGGTTGTTAAGTTTCTTCTTTCCAAAGGATACATCGTTCATGGCACTGTTAGACAACCTGGTGATGAGAAATATGCTCACTTGATGAAGCTTGAGGGAGCTTCTGAGAATCTTAAACTCTTCAAAGCAGATTTGTTGAGTTATGAATCAGTTCAGTCAGCAATTGCTGGATGCAATGCTGTTTTCCATGTTGCTTGCCCTGTGCCTTCAACAACATCAACCAACCCTGAGGTAGAAATGATTGAGCCCGCCGTCAAGGGAACTACCAATGTGCTTGAAGCTTCTCTTGAAGCTAAAGTGGAACGAGTCGTCTATGTGTCATCTGTAGCCGCTGCTTTCATGAACCCAAATTTTCCAAATGACAAAGTGATTGATGAATCTTGTTGGTCTGATAAAGACTATTGCAGAAAATCCAATAACTGGTATTGCTTCTCCAAGACAGAGGCTGAAGAGCAGGCCCTAGACTTTGCGAAAAGAACCGGGCTTGATGTGGTGAGCATTTGTCCTACCCTTGTGCTTGGACCCATTTTAAGGTCATCTATTGTGAATGCAAGTAGCTTGGTTCTCCTCAAGATTTTGAAAGGTTGTGAATCATTGGAGAACAAACATCGTTGGATAGTTGACGTGCGAGATGTAGCCGATGCAATTCTTTTGGCTTATGAAAAGCCTGAAGCAGAAGGGAGATATATATGCACTTCACACCCTGTTAAAGCAAAGGATATGGTGGAGAAATTGAAGAGTAAATATCCAAACTACAACTACCCTACAAACTTTGTTGAGGTGGATGATCATCAAACAAAGTTAAGCTCAGAGAAACTACAGAGGCTTGGTTGGAGATACAAGCCATTGGAGGAGACACTCACTGATGCTGTTGAGAGCTATAAAGAAGCTGGTCTCTTGCAATCAAAGTAA 981 0.423 MAMAASAAKKKICVTGAGGFLASWVVKFLLSKGYIVHGTVRQPGDEKYAHLMKLEGASENLKLFKADLLSYESVQSAIAGCNAVFHVACPVPSTTSTNPEVEMIEPAVKGTTNVLEASLEAKVERVVYVSSVAAAFMNPNFPNDKVIDESCWSDKDYCRKSNNWYCFSKTEAEEQALDFAKRTGLDVVSICPTLVLGPILRSSIVNASSLVLLKILKGCESLENKHRWIVDVRDVADAILLAYEKPEAEGRYICTSHPVKAKDMVEKLKSKYPNYNYPTNFVEVDDHQTKLSSEKLQRLGWRYKPLEETLTDAVESYKEAGLLQSK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00178 326 Pfam NAD dependent epimerase/dehydratase family 12 249 IPR001509 -
Aip09g00178 326 Gene3D - 2 326 - -
Aip09g00178 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 319 IPR036291 -
Aip09g00178 326 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 7 323 - -
Aip09g00178 326 CDD FR_SDR_e 13 301 - -
Aip09g00178 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00178 Aip-Chr9 1497084 1499895 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00178 5 323 Monolignol Biosynthesis Gene Families AT2G33590 65.000 3.41e-152 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00178 - - gmx:100784817 493.812