Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00172 ATGAAGAAAATGGCGACAGCGACGGCGAAGAAGGTATGCGTGACCGGTGCCGGTGGTTTCGTAGCTTCTTGGCTCGTTAAGCTTCTCCTTTCCAAAGGATACATCGTTCATGGCACTGTTAGAAAACCTGGTGATGAGAAATATGCTCACTTGATGAAGTTTGAAGGAGCTTCTGAGAAACTTAAACTGTTCAATGCAGATTTGTTGAGTTATGAATCCATTTATTCAGCAATTGTTGGATGCAGTGCAGTTTTCCATGTTGCTTGCCCTGTACCTGCATTAGCAACAACTTTCCAAAATCCTGAGGTAGAAATGGTTGAGCCTGCTGTGAAGGGAACTAGTAATGTACTTGAAGCTTCTCTTCAGGCTAAAGTGGAGAGAGTTGTTTATGTCTCATCCTCAACTGCTATTATCCTGAACCCGAATTTGCCTAATGATAAAGTGATTGATGAATCATATTGGTCTGATAAAGAGTACTGCAGAAAAACCAAGGAATGGTATCCCTTTTCAAAGATGAAAGCAGAAGAGCTGGCGCTGGATTTTGCAGAAAGAACCGGGATTGATCTAGTGAGAATTTGTCCAACTGTTGTGTTGGGGCCAATTTTGCAGTCAACTTCTCTGAATGCCACTAGCTTGTTTCTCCTCAACCTTCTAAAAGGCTGTGAGCCAGTGGAGAATAAGCTTAAGTGGATAATAGATGTAAGAGATTTAGCTGATGCATTACTATTGGCTTATGAGAAGATTGAAGCAGAAGGGAGATACATATGCACTTCATGCCCTGCTAAACCAAAGGATTTGGTAGAGGAATTGAAGAGTGAATATCCAAACTACAACTACCCTACAAAGTTGAGCTCCGAGAAACTACAGAGACTTGGTTGGAGTTACAGGCCATTAAAGGAGACACTCATTGATTCTGTTGAGAGCTATAAGGAGGCTGGTCTCTTATAA 948 0.4177 MKKMATATAKKVCVTGAGGFVASWLVKLLLSKGYIVHGTVRKPGDEKYAHLMKFEGASEKLKLFNADLLSYESIYSAIVGCSAVFHVACPVPALATTFQNPEVEMVEPAVKGTSNVLEASLQAKVERVVYVSSSTAIILNPNLPNDKVIDESYWSDKEYCRKTKEWYPFSKMKAEELALDFAERTGIDLVRICPTVVLGPILQSTSLNATSLFLLNLLKGCEPVENKLKWIIDVRDLADALLLAYEKIEAEGRYICTSCPAKPKDLVEELKSEYPNYNYPTKLSSEKLQRLGWSYRPLKETLIDSVESYKEAGLL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00172 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 310 IPR036291 -
Aip09g00172 315 Gene3D - 2 315 - -
Aip09g00172 315 CDD FR_SDR_e 12 293 - -
Aip09g00172 315 Pfam NAD dependent epimerase/dehydratase family 12 250 IPR001509 -
Aip09g00172 315 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 314 - -
Aip09g00172 315 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00172 Aip-Chr9 1455018 1457287 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00172 4 315 Monolignol Biosynthesis Gene Families AT2G33590 58.696 2.08e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00172 - - gmx:100784817 422.55