Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00157 ATGGAGAATCATACTAACGAAGAAATTCCATCAGCACCATCAACACCAGCCACACCAGGGACTCCAGGTGCACCTCTCTTCGGAGGTTTCAGATCCACCAACAATAATGGTGGAGGTCTTAGTAGAAAATCACTCCTCAAGAACTGCAAGTGTTTCAGCGTTGAAGAATGGACCATTGAAGATGGTGCTTTACCCAAAGTCTCTTGCTCTTTGCCACCTCCTCCTGTTCCTCTTGCCAGAAAGGTGGGAGCTGAGTTCATCGGAACGTTCATTCTAATGTTCGCCGGAACAGCGGCGGCGATAGTAAACGAGAAGACAAATGGATCCGAGACTCTAATTGGCTGTGCTGCCGTCACTGGCCTTGCTGTTATGGTGATCATCCTCTCCACCGGACATATATCCGGTGCTCATCTTAACCCTGCTGTCACCATCTCCTTTGCCGCTTTGAAGCACTTCCCATGGAGGAATGTGCCAATGTATATTGGAGCACAGATATTGGCATCAGTGTGTGCGGCATTTGCACTGAAGGGAGTGTATCATCCATTCATGGGGGGAGGAGTGACGGTTCCTTCAGGAGGATATGGCCAAGCTTTTGCTTTAGAATTCATCATCAGCTTCAATCTCATGTTTGTTGTCACTGCTGTCGCCACCGACACTAGAGCTGTTGGAGAGTTAGCGGGAATCGCGGTGGGAGCCACTGTCATGCTCAACATACTCATAGCCGGGCCAGCATCAGGGGGATCAATGAACCCAGTAAGAACATTAGGTCCAGCAATTGCAGCAAATAATTACAAAGCAATTTGGATTTATTTGATCGCTCCAATTCTTGGTGCACTTGGTGGTGCTGGTGCTTATTCTGCTGTTAAACTTCCTAATGAAGATGAAAACCCTGAACTCAAGGCTCCTTCAAATCATGGAAGCTTCAGAAGGTGA 933 0.478 MENHTNEEIPSAPSTPATPGTPGAPLFGGFRSTNNNGGGLSRKSLLKNCKCFSVEEWTIEDGALPKVSCSLPPPPVPLARKVGAEFIGTFILMFAGTAAAIVNEKTNGSETLIGCAAVTGLAVMVIILSTGHISGAHLNPAVTISFAALKHFPWRNVPMYIGAQILASVCAAFALKGVYHPFMGGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPASGGSMNPVRTLGPAIAANNYKAIWIYLIAPILGALGGAGAYSAVKLPNEDENPELKAPSNHGSFRR 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00157 310 ProSitePatterns MIP family signature. 137 145 IPR022357 -
Aip09g00157 310 CDD MIP 80 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g00157 310 MobiDBLite consensus disorder prediction 1 32 - -
Aip09g00157 310 SUPERFAMILY Aquaporin-like 77 298 IPR023271 -
Aip09g00157 310 Pfam Major intrinsic protein 78 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g00157 310 Gene3D Glycerol uptake facilitator protein. 75 299 IPR023271 -
Aip09g00157 310 PRINTS Major intrinsic protein family signature 80 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g00157 310 PRINTS Major intrinsic protein family signature 119 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g00157 310 PRINTS Major intrinsic protein family signature 156 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g00157 310 PRINTS Major intrinsic protein family signature 200 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g00157 310 PRINTS Major intrinsic protein family signature 231 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g00157 310 PRINTS Major intrinsic protein family signature 268 288 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip09g00157 310 PANTHER BNAA02G36290D PROTEIN 6 297 - -
Aip09g00157 310 PANTHER AQUAPORIN NIP2-1 6 297 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00157 Aip-Chr9 1335171 1338899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00157 6 310 Major Intrinsic Protein MIP AT1G80760 76.299 6.28e-165 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00157 K09874 - gmx:100815637 446.817