Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00156 ATGGTGAATGAGATGAAAAATGACATGGGTCGATCCAAGTTTTCGGTTAGGGAAGTTGGTGACCCACCATATCGCATACACGTGTTCTCACAATGTAGGTTTGATCTTTCTGCTTCTGAATGCGTGAAGTGCTTCAAATCCCTTCAAAGCGTTTTTCCAAGTTGCTTGCCTGCCAAGGGTGCTCGAACCTTTTCAAGTGATGGCTGTTTTATGCGCTATGATAATTATAGCTTTTTTCGAGAGAGCGTTACCCCTTATTATTTGAGGGGATGTAGTGGTGAGAAAGCAAAAGATGAAAAAGGATTTGTTGGTTTGGCAGTAAATGTAATAAATAAAATGGCATTCGAGGCACCCAAAAAGGATGGCTACACAGCCATAGAAGGACGGCGTCAAGGTTCGAATCTCGTCGTCTATGGTGCGGCCACTTGCTGGAAAACATTGAGCGAGGATTTGTGTGCTGCTTGCCTATCAAATGCTGCTAGCACCGCCATATCATGTTTGCCATCAACACAGGTCCATGTTATCAACACTGGATGCATTTTGCGTTATGCTGATTATGACTTCATTATTGTTGACTTGaaaaacaaacaaagagAAATTTTGATGAAATGCACAGCAATTCTTCTTGGTGCAATTGCTATTTGTTCATTGCTTATTGTAGTTGCACACCATGGGACTAAAAATGTTGACAAACTCTGGGGTATTCCAATTTTACGAACAGGACTAGAGATGAACCCAAGTAGAGTAAAATTAAGCTCATGGTTCATGCAGTTCGAGTACTCGACATTAGAGAGAGCAACCAATGTTTTCAATGAATTCCATAAACTTGGTGAAGGGGGATATGGTGAAGTTTACAAGGGAAAGCAACAAGTTCACAATGAAATTGATGTATATAGCAAAGCTCAACACAAGAATCTAGTTCGGTTCCTTGGTTGCTGCTTCACCTCCACAGAAAGCTATCTGGTTTTTGAATTCCTTGCAAACAAAAGCCTTAACTGCATCTTGTTTGATCCGGAGAAGAAGAAACAGTTGGATTGGCCAAAGAGGCAGGGTATAATCCTTGGCGTAGCTGATGGATTGGAACATCTGCATAGCAATTCTGAAGGGCCAATAATTCATAGAGACATCAAAGCCGGAAACATTTTATTAGACTTGAAATATAGACCAAAGATCTCTGATTTTGGCTTAGCAAAGTTGAAGTCCTATGACTCTACATCTATTGTAGGCACATTGGGGTATATGGCACCGGAATATCTTGCTGGTTGTCCCATAACAGAGAAAGTAGACGTTTACAGCTTTGGAATATTAGTGCTTGAAATTATCAGTGGAGTGGAGAATGCAAAATTTGAGTCTAATGAAGAAACATTTGAGACTCTTGTTTCTCATGCATGGAAGCATTTCAAATCAAACACTACGTCAAAAATTATTGATGAAAGCATGGAAAATCAAGATGTTGAAGAAATTGCAAGAGTTATCCATGTGGGACTTCTGTGTACACAAGAGTTGCCGTATCTGCGTCCCAGCATGACAGAGGTGGTAGCAATGCTTAGACAGAAAGATGTTGTAATGCCAGTACCTTCCAAACCTCCTTTCATGGTTGATTCTTTGGAATTTCCACAAGAAACAGAATCTAGTTGGGAATCGAAAGGTTCAGATGATTCAGAATCGACAGTACCTTTAAATTTTGGAGAAAGAAGTGTGTAA 1704 0.3991 MVNEMKNDMGRSKFSVREVGDPPYRIHVFSQCRFDLSASECVKCFKSLQSVFPSCLPAKGARTFSSDGCFMRYDNYSFFRESVTPYYLRGCSGEKAKDEKGFVGLAVNVINKMAFEAPKKDGYTAIEGRRQGSNLVVYGAATCWKTLSEDLCAACLSNAASTAISCLPSTQVHVINTGCILRYADYDFIIVDLKNKQREILMKCTAILLGAIAICSLLIVVAHHGTKNVDKLWGIPILRTGLEMNPSRVKLSSWFMQFEYSTLERATNVFNEFHKLGEGGYGEVYKGKQQVHNEIDVYSKAQHKNLVRFLGCCFTSTESYLVFEFLANKSLNCILFDPEKKKQLDWPKRQGIILGVADGLEHLHSNSEGPIIHRDIKAGNILLDLKYRPKISDFGLAKLKSYDSTSIVGTLGYMAPEYLAGCPITEKVDVYSFGILVLEIISGVENAKFESNEETFETLVSHAWKHFKSNTTSKIIDESMENQDVEEIARVIHVGLLCTQELPYLRPSMTEVVAMLRQKDVVMPVPSKPPFMVDSLEFPQETESSWESKGSDDSESTVPLNFGERSV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00156 567 Gene3D Transferase(Phosphotransferase) domain 1 326 529 - -
Aip09g00156 567 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 2 288 - -
Aip09g00156 567 MobiDBLite consensus disorder prediction 538 567 - -
Aip09g00156 567 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 288 549 - -
Aip09g00156 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Aip09g00156 567 Pfam Salt stress response/antifungal 95 186 IPR002902 -
Aip09g00156 567 Pfam Salt stress response/antifungal 13 76 IPR002902 -
Aip09g00156 567 SMART serkin_6 270 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00156 567 ProSiteProfiles Protein kinase domain profile. 270 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00156 567 SUPERFAMILY Protein kinase-like (PK-like) 253 545 IPR011009 -
Aip09g00156 567 Gene3D - 84 188 IPR038408 -
Aip09g00156 567 Gene3D - 1 78 IPR038408 -
Aip09g00156 567 Pfam Protein kinase domain 288 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00156 567 ProSiteProfiles Gnk2-homologous domain profile. 84 188 IPR002902 -
Aip09g00156 567 MobiDBLite consensus disorder prediction 533 567 - -
Aip09g00156 567 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 288 - -
Aip09g00156 567 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 288 549 - -
Aip09g00156 567 Gene3D Phosphorylase Kinase; domain 1 290 325 - -
Aip09g00156 567 ProSiteProfiles Gnk2-homologous domain profile. 1 78 IPR002902 -
Aip09g00156 567 Gene3D Phosphorylase Kinase; domain 1 243 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00156 Aip-Chr9 1302294 1306232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00156 2 536 Receptor kinase-like Gene Family AT4G28670 44.634 5.10e-161 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g00156 Pkinase 6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00156 - - aip:107614699 1131.32