Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00149 ATGGCTCCAGAGCATCCACAGTTTATGTCAAGCACTGGCAATCACAGCTTCACAAATGCACCCTTAATAGACTCCATTGATGTTCACCAAATTGAAGTTCCTGATAGGAGGAGTTGGAAGAATTTATTTGCATATATGGGGCCTGGATTTCTTGTTTCTATTGCATACATAGACCCAGGAAACTTTGAGACGGATCTTCAATCTGGAGCACAATATAAATATGAGTTACTTTGGATTGTATTGTTGGCATCATGTGCTGCTCTTGTGATTCAATCAATGGCAGCAAATCTTGGAGTTGTAACTGGAAAGCACTTGGCAGAGCATTGTAGAACTGAATATCCGCAAGTACCCAACACGATCCTTTGGATCATTGCTGAAATTTCTGTTGTGGCATGTGATATTCCAGAAGTAATTGGAACAGCTTTTGCATTGAACATGCTCTTCAGTATACCTGTTTGGATTGGTGTTCTTCTTACAGGGCTAAGTACATTGATTCTCTTAGCATTACAACAATATGGGGTAATTAGAAAACTCGAATTCTTAATTGCTTTTCTGGTATTTACCATCTGTGCTTGCTTTATGGCTGAGCTTGGATATGCAAAGCCTGATGCAAAAGAAGTTGTGAAGGGTATGTTTGTTCCACAGCTTAAAGGAAATGGTGCTACCGGTCTTGCAATTTCGCTCCTCGGCGCTTTGGTTATGCCACACAATCTCTTCCTCCACTCTGCATTAGTACTTTCGAGGAAAATACCTCGATCCGTTCGTGGAATCAAGGAAGCTTGCAGATTTTACATGATAGAAAGTGGATTTGCTCTTATGGTGGCCTTCCTCATAAATATCTCTGTTATTTCTGTAAGTGGTGCAGTTTGCAATTCTTCAAATTTGAGTGCAGATGATCAGAAGAGCTGTGAGGATTTGGATTTGAACAAAGCCTCATTTCTACTAAGAAATGTGTTGGGGAAATGGAGTTCAAAACTCTTTGCAATTGCTTTGCTAGCATCTGGTCAAAGTTCTACCATTACAGGAACATATGCAGGGCAATATGGTTTTCTAGATTTGAGACTGAAGCCATGGATTAGGAACATGTTAACTCGTTGCTTAGCCATTACTCCTAGTTTGGTTGTAGCACTGATTGGTGGCTCTTCCGGTGCCGGAGAGCTCATAATTATTGCATCTATGATATTATCATTTGCGCTTCCGTTCGCCTTGATTCCACTTCTCAAGTTCACTAGCAGCAAAACCAAGATGGGAGAACATGTTAACTCTTTGATGATCGCGTCTGTTACTTGGATGATCGGGTCGTTGATCATGACCATAAACATATACTACTTAATATCTAGCTTCATAAAGTTGCTTCTTCATGCTAAGATGAAAATGGTTGGAAAAGTGTTTGTGGGAATACTAGGATTCTCGGGCGTGGCGGTGTACTTAGCCGGAATTGCATATCTGGTGGTGAGGAAGAACAGAAAGGCGACACCATTTTTGGCACTAACATCAGCAGCAGCAGAGGATTGCAATGAGTCACTTTCTCATCTTCCAAGAGAAGACATAGTAAGCATGCAATTGCCTGAGAGAATTGTTAGTCCAGCAGATATTTGA 1599 0.4096 MAPEHPQFMSSTGNHSFTNAPLIDSIDVHQIEVPDRRSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIVLLASCAALVIQSMAANLGVVTGKHLAEHCRTEYPQVPNTILWIIAEISVVACDIPEVIGTAFALNMLFSIPVWIGVLLTGLSTLILLALQQYGVIRKLEFLIAFLVFTICACFMAELGYAKPDAKEVVKGMFVPQLKGNGATGLAISLLGALVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMIESGFALMVAFLINISVISVSGAVCNSSNLSADDQKSCEDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYGFLDLRLKPWIRNMLTRCLAITPSLVVALIGGSSGAGELIIIASMILSFALPFALIPLLKFTSSKTKMGEHVNSLMIASVTWMIGSLIMTINIYYLISSFIKLLLHAKMKMVGKVFVGILGFSGVAVYLAGIAYLVVRKNRKATPFLALTSAAAEDCNESLSHLPREDIVSMQLPERIVSPADI 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00149 532 Pfam Natural resistance-associated macrophage protein 62 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00149 532 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 8 527 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00149 532 Hamap Divalent metal cation transporter MntH [mntH]. 34 448 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00149 532 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 41 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00149 532 PRINTS Natural resistance-associated macrophage protein signature 121 147 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00149 532 PRINTS Natural resistance-associated macrophage protein signature 335 354 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00149 532 PRINTS Natural resistance-associated macrophage protein signature 225 248 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00149 532 PRINTS Natural resistance-associated macrophage protein signature 392 411 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00149 532 PRINTS Natural resistance-associated macrophage protein signature 175 196 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00149 532 PRINTS Natural resistance-associated macrophage protein signature 149 168 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00149 532 PANTHER METAL TRANSPORTER NRAMP1 8 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00149 Aip-Chr9 1236637 1240661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00149 10 532 Inorganic Solute Cotransporters AT1G15960 77.652 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00149 K21398 - gmx:100808501 851.277