Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00144 ATGGATTGTTCTTCTTGGATTAACACTTCCTTGGATCTCAACATTAATCCTCATCATCATAGAGTTCATCACGAGGAAGTTCCTAAGAAACAGGTTGAAAGCAATGTTTTCTCATTGGGGTTGTCCATGGTTCCTTTGAAAGAAGAGTCCAATACCGATTACTTAGAAGAGGAACTGAAGCGTGTGACTGCCGAAAACAAGAAATTGGCTGAAATGCTCTCTGTGGTTTGTGAGAATTACAACACTTTGAGGAACCACTTGATGGAATACATGAAGAAAAATCCTGAGAAGGAGCTTAGCCCTTCATCAAAGAAGAGGAAATCTGAGAGCAGCAACAACAATTGTGATCCGATGGCATTGGCGTCGAACAATGGGAACTCCGAGAGCAGCTCGACCGACGAAGAATCATGCAAGAAGCCAAGGGAAGAAACCATCAAGGCTAAGACCTCAAGAGTTTATGTTAGGACGGAAGCATCCGATACAAGCCTTATTGTGAAAGATGGATACCAATGGAGGAAATATGGACAAAAAGTAACAAGAGATAACCCTTCTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGCTGTCCTGTAAAGAAGAAGGTGCAAAGAAGTGTTGAAGATCAATCTGTGCTGGTTGCGACTTACGAGGGTGAGCACAACCACCCCCTCCCTTCTCAGATGGAGGCAACATCCGGCTCGAACCGTTGTATGACCATAGGTTCGGTGCCTTGTTCGGCATCAATTAGCTCTTCTGCACCAACAGTTACTCTTGACTTGACAAAATCCAAGCCCAACAACAACAATGATTCCAAGATTACAACAAAACCAAAGGTTGATTCACCTGAACAAGTACCTAATGTTTTGGTGGAACAGATGGCTAGTTCATTGACCAAAGATCCAAATTTCAGAGCAGCACTTGTTGCTGCCCTTTCAGGAAGATTGATGCACAATAATTGA 963 0.4309 MDCSSWINTSLDLNINPHHHRVHHEEVPKKQVESNVFSLGLSMVPLKEESNTDYLEEELKRVTAENKKLAEMLSVVCENYNTLRNHLMEYMKKNPEKELSPSSKKRKSESSNNNCDPMALASNNGNSESSSTDEESCKKPREETIKAKTSRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPSQMEATSGSNRCMTIGSVPCSASISSSAPTVTLDLTKSKPNNNNDSKITTKPKVDSPEQVPNVLVEQMASSLTKDPNFRAALVAALSGRLMHNN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00144 320 MobiDBLite consensus disorder prediction 94 111 - -
Aip09g00144 320 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 320 IPR044810 GO:0003700
Aip09g00144 320 MobiDBLite consensus disorder prediction 260 283 - -
Aip09g00144 320 PANTHER TRANSCRIPTION FACTOR 1 320 - -
Aip09g00144 320 SUPERFAMILY WRKY DNA-binding domain 162 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip09g00144 320 Coils Coil 52 72 - -
Aip09g00144 320 SMART WRKY_cls 165 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00144 320 MobiDBLite consensus disorder prediction 112 131 - -
Aip09g00144 320 MobiDBLite consensus disorder prediction 94 151 - -
Aip09g00144 320 ProSiteProfiles WRKY domain profile. 160 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00144 320 MobiDBLite consensus disorder prediction 260 282 - -
Aip09g00144 320 Gene3D WRKY domain 148 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip09g00144 320 Pfam WRKY DNA -binding domain 166 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00144 320 MobiDBLite consensus disorder prediction 132 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00144 Aip-Chr9 1145757 1148076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00144 4 320 WRKY Transcription Factor Family AT1G80840 53.799 9.98e-104 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip09g00144 WRKY 2.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00144 - - gmx:100807966 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00144 09 1145757 1148076 Aip09g00144 09 1145757 1148076 ECH