Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00122 ATGGCTTCTTCAAAGGCAGCATCAGAAGGAAAAGCCATTGGCATCGACCTCGGCACCACCTACAGCTGCGTCGGAGTGTGGCAAAACGACCGCGTTGAGATCATTGCCAACGACCAAGGAAACAGAACAACGCCTTCTTACGTTGCCTTCACTGACACGGAACGTCTCATCGGTGATGCAGCCAAGAACCAAGTCGCCATGAACCCTCACAACACTGTCTTCGATGCCAAGCGTCTCATCGGTCGCAAGTTCTCCGATCCTTCCGTACAGGCCGACATGAAGCACTGGCCGTTTAAGGTTGTTCCTGGCCCCGCCGACAAGCCTATGATCGTCGTCAACTACAAAGGCGAAGAAAAGCACTTTGCAGCTGAAGAGATTTCTTCAATGGTGTTAACGAAGATGAAGGAAGTTGCGGAAGCTTTTCTTGGTCACACTATCAAGAACGCTGTGGTCACTGTCCCTGCTTACTTCAATGATTCTCAGAGACAAGCCACCAAAGACGCCGGCGCCATTGCCGGTCTCAATGTTTTGAGGATCATCAATGAACCTACAGCTGCAGCCATTGCTTACGGTTTGGACAAGAAGGCTTCGAGATCCGGCGAGAAGAACGTTCTGATCTTCGATCTCGGTGGTGGAACCTTTGATGTATCGCTTCTTACTATTGAGGAAGGAATCTTTGAGGTGAAGGCCACCGCCGGAGACACTCATTTGGGCGGCGAAGACTTCGATAATAGGCTTGTGAATCATTTTGCGGCAGAGTTCAAGAGGAAGCACAAGAAGGATATTAGTACGAATGCGAGAGCTCTTAGGAGGTTGAGAACTGCTTGTGAGAGAGCCAAAAGGACTCTCTCTTCCACTGCTCAAACCACCATTGAGATCGATTCGCTCTTTGAAGGTATCGATTTTTATTCAACCATCACAAGAGCGAGGTTCGAGGAATTGAACATGGATTTGTTCAGGAAATGCATGGAGCCAGTGGAGAAGTGTTTAAGGGACTCAAAGATCGATAAGAGCCAAGTTCATGATGTGGTTCTTGTTGGAGGCTCAACAAGGATTCCAAAAGTGCAGCAACTGTTACAAGATTTCTTCAACGGCAAGGAACTCTGCAAGAGCATCAACCCTGACGAAGCTGTAGCTTATGGCGCTGCGGTTCAGGCCGCCATATTAAGCGGCGAAGGCAACGAGAAGGTTCAAGATCTGCTGCTCTTAGACGTCACTCCTCTCAGCCTTGGACTCGAAACCGCCGGCGGAGTCATGACGGTTTTGATTCCAAGAAACACAACGATTCCTACCAAAAAGGAACAGATCTTTTCTACTTACTCCGATAATCAACCAGGAGTGCTAATTCAAGTCTATGAAGGGGAGAGGGCGAGGACCAAAGATAACAATCTTTTAGGGAAATTCGAGCTGACCGGAATCCCACCGGCGCCGAGAGGAGTTCCTCAGATCAATGTTTGCTTTGATATTGATGCGAACGGAATCTTGAACGTGTCGGCAGAGGATAAGACGGCCGGTGTGAAGAACAAGATCACGATTACTAATGACAAAGGGAGGTTGAGCAAGGAAGAGATTGAGAAGATGGTTCAAGAGGCAGAGAAGTATAAGGCAGAGGATGAGGAAGTGAAGAAGAAAGTGGAGGCTAAGAACAATTTGGAGAATTTTGCTTATAACATGAGGAACACTGTGAAGGATGAGAAGTTTGCTAGTAAGTTGGATCCTTCTGATAAGGAGAAGATTGAGAAGGCTGTTGATGATGCTATTGAATGGGTTGAAGGGAATCAGTTGGCTGAGGTGGATGAATTTGAAGATAAGTTGAAGGAGTTGGAAGGTTTGTGTAATCCAATAATTTCCAAGATGTACCAAGGTGGTGGTGGTGCTGGTGATGTGCCTATGGGAGGTGGTGCAGATGGTGCATCTTATGGAAATGCTTCATCTGGTGGCAATAATGGTGCTGGTCCTAAGATTGAAGAAGTTGATTAA 1980 0.4727 MASSKAASEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFSDPSVQADMKHWPFKVVPGPADKPMIVVNYKGEEKHFAAEEISSMVLTKMKEVAEAFLGHTIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFAAEFKRKHKKDISTNARALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVEAKNNLENFAYNMRNTVKDEKFASKLDPSDKEKIEKAVDDAIEWVEGNQLAEVDEFEDKLKELEGLCNPIISKMYQGGGGAGDVPMGGGADGASYGNASSGGNNGAGPKIEEVD 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00122 659 CDD HSPA1-2_6-8-like_NBD 12 390 - -
Aip09g00122 659 Gene3D Actin; Chain A, domain 4 238 321 - -
Aip09g00122 659 Gene3D - 13 387 - -
Aip09g00122 659 MobiDBLite consensus disorder prediction 622 659 - -
Aip09g00122 659 Gene3D - 195 369 - -
Aip09g00122 659 ProSitePatterns Heat shock hsp70 proteins family signature 1. 15 22 IPR018181 -
Aip09g00122 659 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Aip09g00122 659 Gene3D - 548 622 IPR029048 -
Aip09g00122 659 PRINTS 70kDa heat shock protein signature 11 24 - -
Aip09g00122 659 PRINTS 70kDa heat shock protein signature 39 51 - -
Aip09g00122 659 PRINTS 70kDa heat shock protein signature 61 69 - -
Aip09g00122 659 PRINTS 70kDa heat shock protein signature 149 169 - -
Aip09g00122 659 PRINTS 70kDa heat shock protein signature 212 222 - -
Aip09g00122 659 PRINTS 70kDa heat shock protein signature 340 356 - -
Aip09g00122 659 PRINTS 70kDa heat shock protein signature 372 392 - -
Aip09g00122 659 PRINTS 70kDa heat shock protein signature 399 418 - -
Aip09g00122 659 PRINTS 70kDa heat shock protein signature 480 496 - -
Aip09g00122 659 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 552 IPR029047 -
Aip09g00122 659 Coils Coil 521 551 - -
Aip09g00122 659 Pfam Hsp70 protein 12 621 IPR013126 GO:0005524|GO:0140662
Aip09g00122 659 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 7 632 - -
Aip09g00122 659 Gene3D - 74 129 - -
Aip09g00122 659 PANTHER HEAT SHOCK PROTEIN 70KDA 7 632 IPR013126 GO:0005524|GO:0140662
Aip09g00122 659 SUPERFAMILY Actin-like ATPase domain 200 391 IPR043129 -
Aip09g00122 659 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 546 627 IPR029048 -
Aip09g00122 659 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 547 IPR029047 -
Aip09g00122 659 SUPERFAMILY Actin-like ATPase domain 11 194 IPR043129 -
Aip09g00122 659 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00122 Aip-Chr9 961766 964416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00122 6 659 Calmodulin-binding Proteins AT1G16030 86.086 0.0 1168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00122 K03283 - twl:120010850 1131.32