Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00114 ATGTCGTTGTTGCTGCCTTCAACGAGCTCTGCAGATGCAAGGAGCTCAGAGGCCTTCGTTGCACTTTGCTTGCTGACTATTGCTGGAACTTCACTTGCCATGCAGCATTTGGATTTTATCACTTTACTTGAACCCTTATATGCTTGGAACAAATTGGCAAACATATTATTCTGTGATTCTCTTGCTGGTGTCGGGTTTTTGTACTCGAATAAGACGACGGATCTGTACACATTTGGTGACCAGAGAACAGCTGAAGATGCCTATGCATTTCTTGTTAAGTGGTTTGAAAGATTTCTTCAGTATAAGCATAGAGAGTTCTACATTGCTGGAGAAAGCTATGCAGGGCACTATGTTCCTCAGTTGTCTCAAATTATTTATGAGAGAAACAAGGGAATCAAGAATCCAGTGCTAAATTTCAAGGGATTTATGTTGATTGGTGTGGAACCAACTGAAAGTTCAGTGCTGTCAGGTGGAAAACCTGATCTCACATGTTGGATTACTAGCTTGCTCTGCAGCGATGTGTTAGAAAAGATGCTGTTTTCTTGCTGCCAACCATATCTATGA 564 0.4149 MSLLLPSTSSADARSSEAFVALCLLTIAGTSLAMQHLDFITLLEPLYAWNKLANILFCDSLAGVGFLYSNKTTDLYTFGDQRTAEDAYAFLVKWFERFLQYKHREFYIAGESYAGHYVPQLSQIIYERNKGIKNPVLNFKGFMLIGVEPTESSVLSGGKPDLTCWITSLLCSDVLEKMLFSCCQPYL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00114 187 Pfam Serine carboxypeptidase 42 145 IPR001563 GO:0004185|GO:0006508
Aip09g00114 187 SUPERFAMILY alpha/beta-Hydrolases 41 145 IPR029058 -
Aip09g00114 187 PRINTS Carboxypeptidase C serine protease (S10) family signature 58 68 IPR001563 GO:0004185|GO:0006508
Aip09g00114 187 PRINTS Carboxypeptidase C serine protease (S10) family signature 94 119 IPR001563 GO:0004185|GO:0006508
Aip09g00114 187 PRINTS Carboxypeptidase C serine protease (S10) family signature 45 57 IPR001563 GO:0004185|GO:0006508
Aip09g00114 187 ProSitePatterns Serine carboxypeptidases, serine active site. 108 115 IPR018202 GO:0004185
Aip09g00114 187 Gene3D alpha/beta hydrolase 28 162 IPR029058 -
Aip09g00114 187 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 144 IPR001563 GO:0004185|GO:0006508
Aip09g00114 187 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 40 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00114 Aip-Chr9 929820 932446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00114 11 57 Inorganic Solute Cotransporters AT4G04850 57.447 1.46e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00114 K16297 - aip:107643618 266.159