Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00104 ATGAAGGAGAGGTTTTGTGAGCTCTGCAAGGAAAAAGCTTCTCTCTACTGCGCCTCTGACTCCGCCTTCCTTTGCTGGAAATGCGACGCCACCGTTCATAATGCCAACTTCCTCGTCGCTCGCCACCGCCGCCGCCTCCTCTGTTTCAACTGCAATTCCTTCGCCGGAGTCCACATCTCCGGCGCCTCGTCTCGCCGCACCGCCGCCAACTGCCGATCCTGCTCCCCGACGGAGATTCATTACTCCGACGAGGAGGAGGAGGAGGAGGAGGAGGACAATTCCCTCTGTTCTTCACCTCCTTCTTCCTCGTCCTCCTCCTCTGCATGCGTTTCCAGCTCGGAGCCACGCGCCGGCAACAAGATCAGAACAAAATACTTGCCGGAAAAGAGAATCAGAACGGTAACCTCTTCCGGTTCGGCGGTTACGACGGACGACGATGATTTTTCAACGCCGAAGCAAAAGCGGCAGAGGAATAACAAGAAGAAGAATAGTAATGGCGGTGGATCTGGTTCCGATGAGGTAAGAACGGCGTCGGCGAAAGAGTATTCAGTGTTCGCGAAATGGAGCGAGGAATTAGGGTTGGGATTAAACGAGGGGAGACGCGTGTCGTGCGTGGCGTGCAGAGCGTTGAGAGTATGGGTGAGAAAATGGAAGGGAGTTGGTATTCCGTATAAGGTGGGTGCTGCGACGTCGTTTTGGTTAGGTTTGAGATTTTGTGGGATGACGTTCGAGAATCTGCGGAGATTGGAAGAGATCTCAGGTGTGCCAGCTAAGCTCATTCTCCAAGCATATGCCATGCTCTCACGTGTCTTCTTCTTCTCCCAACAACAACAAACCACTTCTCCCTTCTTCCATTTGCAAGAAGGCtctgatgagtcttag 882 0.5249 MKERFCELCKEKASLYCASDSAFLCWKCDATVHNANFLVARHRRRLLCFNCNSFAGVHISGASSRRTAANCRSCSPTEIHYSDEEEEEEEEDNSLCSSPPSSSSSSSACVSSSEPRAGNKIRTKYLPEKRIRTVTSSGSAVTTDDDDFSTPKQKRQRNNKKKNSNGGGSGSDEVRTASAKEYSVFAKWSEELGLGLNEGRRVSCVACRALRVWVRKWKGVGIPYKVGAATSFWLGLRFCGMTFENLRRLEEISGVPAKLILQAYAMLSRVFFFSQQQQTTSPFFHLQEGSDES 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00104 293 SMART bboxneu5 1 47 IPR000315 GO:0008270
Aip09g00104 293 PANTHER B-BOX ZINC FINGER PROTEIN 32-LIKE 2 266 - -
Aip09g00104 293 Pfam B-box zinc finger 2 44 IPR000315 GO:0008270
Aip09g00104 293 MobiDBLite consensus disorder prediction 95 118 - -
Aip09g00104 293 MobiDBLite consensus disorder prediction 82 174 - -
Aip09g00104 293 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 266 - -
Aip09g00104 293 MobiDBLite consensus disorder prediction 130 146 - -
Aip09g00104 293 CDD Bbox1_BBX-like 6 47 - -
Aip09g00104 293 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00104 Aip-Chr9 855848 857242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00104 1 74 C2C2-CO-like Transcription Factor Family AT5G54470 50.000 4.28e-16 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip09g00104 zf-B_box 7.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00104 - - adu:107463828 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00104 09 855848 857242 Aip09g00104 09 855848 857242 ECH