Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00079 ATGTTCCTCAGAAAACACGGTCTCTTCTTGTTACTCACCACAGTTGTTGTCCTTTCTGCCACCACCGCCATATCACCAGGCTCCACCCTCTCAGCTACCTCCAAGCAAACATGGAGTTCATCGAGCTCTACCTTCTTCTTAGGCTTCGTCCCCGTCAACCCACCCACCACCCCTCCCACCTTCACCGCCTCCATCTTCTACTCCGGCAACTCCCCCGTCGTCTGGTCCGCCGCCAACGCCACGCCCGTCGACTCCGGAGCCTCCCTGCGCTTCCTATCCTCCGGCGCCCTCCGTCTCCTCAACGGCTCCGGCGCCACCGTCTGGGACTCCGGCACGGCCAACCGCGGCGCCTCCTCCGCCACGCTTGAAGACAGTGGCAATTTGGTAATTTCCAACGGAAGCCGCACCCCTCTGTGGCAATCGTTCGACCACCCCACCGATACACTTGTCCCCTCTCAGAATTTCAGTTCCGGTAAGATTCTGAGATCTGGTTCTTACTCTTTTACCCTTCAGAGTAATGGGAATTTAACCCTGTATTGGAACGATAGCATCTTGTATTGGAACCATGGTTTGAATTCCTCTGTTAATGCTGTGAGTAAACCTGTTTTGGCGTTGCAATCCATTGGAATTTTGCAACTTTCTGATACAAATTTGACAGGTGCAGCTATTGTTGCTTATAGTAGTGACTATGCTGAGGGTGGTAGTGATGTTTTGAGGGTTTTGAAATTGGATAATGATGGAAATTTGAGGATTTATAGCACTTCCAAGGGTAGTGGAAACCCTACTGCTAGGTGGGCTGCAGTTGAGGATCAGTGTGAGGTTTATGCTTATTGTGGGAACTATGGTATCTGTAGTTATAATGCTTCGAATCCGGTTTGTGGTTGCCCTTCTCAGAATTTTGAGATGGTGGATCCCAATGATAGTAGGAAAGGGTGTAGGAGGAAGGTGAGTCTCAACAATTGCCAAGGGAATGCAACCATGTTGACCTTGAATCATGCTCAGTTGCTCACTTATTACCCCGAGGATCAGTCGCAGGAGTTCTTCATTGGTATATCAGCTTGCAAGGGAAATTGTCTTTCCAACACTAACGGTTGTTTTGCTTCTACTGCCTTGGGGGATGGCACGGGGCAATGTTACTTGAAGTCGCAAGATTTGGTCTCCGGATATGTGAGTCCAGCACTGCCTAGCACTTCTTATATCAAGGTTTGTCCACCGGTGCTTCAGAATCCGCCACCTTCAGGGGTGTCTGTGAAGCACAAGAGCTCGAGAGTACCGGCTTGGGTTGTGGTGGTTGTGGTTTTGGGCACTGTTCTAGCCTTGGTTGCCTTTGAAGGTGGTTTGTGGATGTGGTGTTGTAGGAACAACAAAAGGTTTGGTGCATTGTCTGCTCAGTATGCTCTCCTTGAGTATGCTTCTGGTGCGCCGGTCCAGTTCTCCTACAAGGAGCTTGAGCGCGCGACAAAGGGCTTCAAGGAGAAGCTTGGAGCTGGAGGATTTGGTGCTGTCTACAGAGGAATTCTTGTTAATAAAACCGTGGCTGCAGTGAAGCAACTCGAGGGCATCGAGCAAGGTGAGAAACAGTTTAGGATGGAAGTTGCTACCATTAGTAGCACTCATCATCTCAACTTGGTTAGGCTTATTGGCTTTTGCTCGGAAGGGCGCCACAGGCTTTTAGTTTATGAGTTCATGAAAAACGGTTCTCTAGATAATTTTCTATTCATGTCAGAGGAACATTCAGGAAAATTGTTGAATTGGGAATATCGATACAGCGTCGCTCTTGGCACTGCGAGGGGCATCACATACCTTCACGAGGAGTGTCGCGACTGCATAGTCCATTGTGATATAAAGCCTGAAAACATTCTCTTAGACGAGAATTATGTTTCTAAGGTATCTGACTTTGGTCTTGCAAAGCTTGTAAATCCAAAGGACCATAGGCATAGGACCTTGACCAGTGTGAGAGGAACCAGAGGATACTTAGCACCCGAGTGGCTTGCAAATCTTCCCATAACATCTAAGTCCGATGTTTACAGCTACGGCATGGTTTTGTTGGAGATTGTGAGTGGAAGGAGGAATTTCGAAGTCTCGGAGGAAACTAATAGGAAAAAGTTCTCCATTTGGGCTTATGAAGAGTTTGAGAAAGGCAACATCATTGGAATTGTGGACAAAAGGCTAGCCGACCAAGAAGTCGACATGGCGCAAGTGACAAGAGCCATTCAGGCAAGCTTTTGGTGCATCCAGGAGCAGCCCTCCCATAGACCGACCATGAGCAGAGTGGTTCAAATGCTTGAAGGCGTTGCTGAGATAGAGAGGCCGCCGGCACCAAGGTTGGCTATGGAAGGACCTGTTGTTAGTGGAACAAGCACAAACATAAGTAGCAATGTCAGTGCATTCTCCACAGCTGCAGCTTCACCCCTTGGTCCTTCGTCGTCGTCGTCATTTCAGACAAGCAGTGTCTCCACCTTAACCTTGGGAAGGAACACCGAGAAGGGATTGCAAGCAAAAGCAGAAGCAATCATTTGTATTGAATTCCTGTAA 2535 0.4856 MFLRKHGLFLLLTTVVVLSATTAISPGSTLSATSKQTWSSSSSTFFLGFVPVNPPTTPPTFTASIFYSGNSPVVWSAANATPVDSGASLRFLSSGALRLLNGSGATVWDSGTANRGASSATLEDSGNLVISNGSRTPLWQSFDHPTDTLVPSQNFSSGKILRSGSYSFTLQSNGNLTLYWNDSILYWNHGLNSSVNAVSKPVLALQSIGILQLSDTNLTGAAIVAYSSDYAEGGSDVLRVLKLDNDGNLRIYSTSKGSGNPTARWAAVEDQCEVYAYCGNYGICSYNASNPVCGCPSQNFEMVDPNDSRKGCRRKVSLNNCQGNATMLTLNHAQLLTYYPEDQSQEFFIGISACKGNCLSNTNGCFASTALGDGTGQCYLKSQDLVSGYVSPALPSTSYIKVCPPVLQNPPPSGVSVKHKSSRVPAWVVVVVVLGTVLALVAFEGGLWMWCCRNNKRFGALSAQYALLEYASGAPVQFSYKELERATKGFKEKLGAGGFGAVYRGILVNKTVAAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFMSEEHSGKLLNWEYRYSVALGTARGITYLHEECRDCIVHCDIKPENILLDENYVSKVSDFGLAKLVNPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSEETNRKKFSIWAYEEFEKGNIIGIVDKRLADQEVDMAQVTRAIQASFWCIQEQPSHRPTMSRVVQMLEGVAEIERPPAPRLAMEGPVVSGTSTNISSNVSAFSTAAASPLGPSSSSSFQTSSVSTLTLGRNTEKGLQAKAEAIICIEFL 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00079 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 190 IPR036426 -
Aip09g00079 844 ProSiteProfiles Bulb-type lectin domain profile. 21 143 IPR001480 -
Aip09g00079 844 Pfam D-mannose binding lectin 73 156 IPR001480 -
Aip09g00079 844 Gene3D - 15 143 IPR036426 -
Aip09g00079 844 ProSiteProfiles Protein kinase domain profile. 488 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00079 844 ProSiteProfiles Bulb-type lectin domain profile. 146 264 IPR001480 -
Aip09g00079 844 SMART serkin_6 488 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00079 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 150 257 IPR036426 -
Aip09g00079 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Aip09g00079 844 CDD STKc_IRAK 494 764 - -
Aip09g00079 844 PIRSF SRK 1 822 IPR024171 GO:0004674
Aip09g00079 844 SMART blect_4 29 145 IPR001480 -
Aip09g00079 844 SUPERFAMILY Protein kinase-like (PK-like) 470 763 IPR011009 -
Aip09g00079 844 ProSiteProfiles PAN/Apple domain profile. 321 403 IPR003609 -
Aip09g00079 844 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 9 829 - -
Aip09g00079 844 Pfam Protein kinase domain 491 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00079 844 Gene3D - 144 268 IPR036426 -
Aip09g00079 844 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Aip09g00079 844 PANTHER OS07G0415500 PROTEIN 9 829 - -
Aip09g00079 844 CDD B_lectin 24 145 IPR001480 -
Aip09g00079 844 Gene3D Phosphorylase Kinase; domain 1 456 562 - -
Aip09g00079 844 Pfam S-locus glycoprotein domain 230 296 IPR000858 GO:0048544
Aip09g00079 844 Gene3D Transferase(Phosphotransferase) domain 1 563 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00079 Aip-Chr9 645056 647901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00079 461 772 Receptor kinase-like Gene Family AT5G20050 44.615 2.17e-81 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip09g00079 Pkinase 1.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00079 - - cam:101506838 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00079 09 645056 647901 Aip09g00079 09 645056 647901 ECH