Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00056 ATGGCCAGGTATGAGTACATGTACACCTCTTTCCTTTGTGTTTTTCTTCTCTGTTGCTGCTACTGCCCCATCATGGTGATGTCTCAGCTGTCTCAAAACCAAACTAGCACCATGGCCAATCTCTCCAAGCTACTTGGTACCTCTGCTCCATGGAATAGTGGCAATCATTCAAATCCATGTTCATGGAATGGAGTCACTTGTGACTCTACCAAATCCCATGTCATCATGATTTCTCTATCTGGGAACTCTCTCTCTTCCAGTGGCTTCCTTCCTGTTCTTTGCCAACTTGAAACCCTGCAGCATCTTGATGTATCCAACAACAGTCTCACCTCAATCCCTGCAGAGTTCATTACTGAATGTGGAAGGATAAAGTACTTAAAGCTGCTGAATTTCAGTAGAAACTTTTTATCAGGTTCTTTACCTACTTTCCTTGGTTTTGATGCACTTGAATATCTAGACATGTCTTTCAATGTATTGGGAAGTAGTATTGATATTCAGTTAGATGAAATGATTAGGCTCAAGAGTTTGAACCTTACTCACAACAACTTCAATGGTACTCTTCCCACCAAATTGGGCAAGTCCATGGTTCTGGAGCAACTTGTGCTCTCTAACAACCAATTTCAAGGAGAAATCCCTGAAGAACTGTTTAGTTATGAAAACTTGACTTTGATTGATCTCGGGGGAAATACTCTTTCAGGTGCAATTCCTACCCATATTGTACAGCTATCTAAGTTGCAAACTTTGATTCTTTCATCTAATAACCTCAGTGGTCCAATTCCAATCTCAATCCTGAACATCACAACCCTTGTAAGATTTGCTGCAAACCTGAACCGTTTCAGTGGTTCTTTACCTTCTGACATTTCAAATAATCTTATCAGTTTGGATCTTAGTGGCAATAGTTTGTCTGGTCCCATTCCAAAAAACATTTTATCTTCACCAAAAATGGAGGTTGTGGATTTGTCCAATAATACTTTGAGTGGAACATTGTTACTCACAAGTATTTCTCCTAGCATGATCAGGTTGAGATTAGGGAACAATTTGCTGAAGGGAGACATTCCCTCAGATGCTTTTGCAAAAGCTCAGAATTTGACATACTTGGAACTGGAAAGTAATGCACTGACAGGAGCAATTCCAGCTATATTGGGTTCTTGCCTCAACCTGGCATTGCTGGATTTGTCTCAGAATCATTTGAGTGGGACATTGCCACCAGAGCTTGGAAATCTTAGCAATCTTCAAGTCTTAAAACTTCAAATGAACAAGTTTTATGGCACAATCACAACTCCATTTCAAATTGGCCAACTACAAAAGTTGTTAACACTGAATTTGAGCCAGAACTCTTTGACCGGATCGATTCCATCCCAGATATCAAGCTTGAGCAACCTTAAGTTCCTGAACTTGCAAATGAACAACCTGAGTGGTTCCATACCTCCATCCATTGGCATCTCAACAAGCCTTCTGGATCTTCAACTAGGTGGAAACCAACTAAGTGGTGCTATCCCAAGTATGCCAATGTCTCTACAGGTTGCCGTGAATCTTAGTAACAACAACTTTAGTGGATCAATTCCCAGCAGTTTGAGTAGTTTGGATAACCTGGAAATATTGGATCTCTCGTATAACAAATTTTCTGGTGGAGTTCCTGATGATCTAGCCGGAATGAAATCTTTGACAGAGTTGTTACTTACTAACAACAATCAGCTTTCTGGTGTTCTTCCAAAATTTACCCATTTTGTTCAGGTTGAATACAATGGAACCAGTTTAGTACTGCCTCCTGCATCGGACAACCCAACACCAAGCTATTACCCGGGATCTAGAAAGAAGGGATCATCTGTTGTTGTGGCAATCCTTGTTGCAATTGCAGCAGCCGTGTTTCTTGTTGGCCTTGTCACTCTGCTGCTTGTGCTTGTGTCACGACACTATTCGAAGGTTAACGATGAGAATATACATTCAGGCGAAGATCATCGCCTTCCTCAGGTTGTCCAAAGTCATTTGTTAACTCTTAATGGTCTCCACAGATCAAACATTGACTTCTCCAAGGCCATGGAAGCTGTTGCTGAAACATCCAATGTTACTTTGAAGACCAGGTTTTCAACTTATTACAAGGCCATCATGCCATCTGGATCAATCTATTTTGTCAAGAAGATGAATTCAACTGAAAGGGCATTGCCAGCGAGCAGCCATGTTAGAATTGGGAAAGAGATGGAGGCCTTGGCGAAATTGAACAATTCAAATGTCATGACTCCTTTAGCCTATGTTTTGTCCAGTGATGCAGCTTACACATTATATGAGTTTGTCTCAAATGGTTCCCTCTTTGATGTTCTTCATCATGGAAGCATGGGAAACTCTTTGGATTGGGCTAGCAGATATAGTATAGCAGTTGGTGTGGCTCAAGGTCTCTCTTTTCTTCATGGCATCACCTCAAGTCCATTACTACTTCTTGATCTGTCAAGTAAAAGTATTATGCTCAAGTCCCTCAAGGAGCCTCTGGTTGGAGATATTGAACACTACAAGGTCATTGATCCTTCCAAAAGTACAGGAAATTTTTCTGCTCTTGCTGGTTCTGTTGGCTATGTTCCTCCAGAGTATGCATATACAATGACAGTAACAGTGGCTGGGAATGTATATAGCTTTGGGGTCATCCTGCTTGAACTGCTGACTGGAAAGCCTGCGGTGACAGAGGGAACCGAATTGGTGAAGTGGGTTTTGCATAATTCAATGAACAAAGATTACATTCTTGATTCCAATGTTAGCAAAACATCTCAAGCTGTGAGAAACCAGATGCTAGCAATTCTGCAGATTGCTCTTGTTTGTGTTAGTACATCCCCAGAAACAAGACCAAAGATGAAGAGTGTGCTAAGAATGCTTCTTAATGCTAGATAG 2877 0.4108 MARYEYMYTSFLCVFLLCCCYCPIMVMSQLSQNQTSTMANLSKLLGTSAPWNSGNHSNPCSWNGVTCDSTKSHVIMISLSGNSLSSSGFLPVLCQLETLQHLDVSNNSLTSIPAEFITECGRIKYLKLLNFSRNFLSGSLPTFLGFDALEYLDMSFNVLGSSIDIQLDEMIRLKSLNLTHNNFNGTLPTKLGKSMVLEQLVLSNNQFQGEIPEELFSYENLTLIDLGGNTLSGAIPTHIVQLSKLQTLILSSNNLSGPIPISILNITTLVRFAANLNRFSGSLPSDISNNLISLDLSGNSLSGPIPKNILSSPKMEVVDLSNNTLSGTLLLTSISPSMIRLRLGNNLLKGDIPSDAFAKAQNLTYLELESNALTGAIPAILGSCLNLALLDLSQNHLSGTLPPELGNLSNLQVLKLQMNKFYGTITTPFQIGQLQKLLTLNLSQNSLTGSIPSQISSLSNLKFLNLQMNNLSGSIPPSIGISTSLLDLQLGGNQLSGAIPSMPMSLQVAVNLSNNNFSGSIPSSLSSLDNLEILDLSYNKFSGGVPDDLAGMKSLTELLLTNNNQLSGVLPKFTHFVQVEYNGTSLVLPPASDNPTPSYYPGSRKKGSSVVVAILVAIAAAVFLVGLVTLLLVLVSRHYSKVNDENIHSGEDHRLPQVVQSHLLTLNGLHRSNIDFSKAMEAVAETSNVTLKTRFSTYYKAIMPSGSIYFVKKMNSTERALPASSHVRIGKEMEALAKLNNSNVMTPLAYVLSSDAAYTLYEFVSNGSLFDVLHHGSMGNSLDWASRYSIAVGVAQGLSFLHGITSSPLLLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGNFSALAGSVGYVPPEYAYTMTVTVAGNVYSFGVILLELLTGKPAVTEGTELVKWVLHNSMNKDYILDSNVSKTSQAVRNQMLAILQIALVCVSTSPETRPKMKSVLRMLLNAR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00056 958 Gene3D Transferase(Phosphotransferase) domain 1 764 958 - -
Aip09g00056 958 SMART LRR_typ_2 528 551 IPR003591 -
Aip09g00056 958 SMART LRR_typ_2 458 482 IPR003591 -
Aip09g00056 958 SMART LRR_typ_2 552 575 IPR003591 -
Aip09g00056 958 SMART LRR_typ_2 170 194 IPR003591 -
Aip09g00056 958 SMART LRR_typ_2 242 266 IPR003591 -
Aip09g00056 958 SMART LRR_typ_2 96 119 IPR003591 -
Aip09g00056 958 SMART LRR_typ_2 434 457 IPR003591 -
Aip09g00056 958 Gene3D Ribonuclease Inhibitor 146 235 IPR032675 -
Aip09g00056 958 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 13 955 - -
Aip09g00056 958 ProSiteProfiles Protein kinase domain profile. 684 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00056 958 Pfam Protein kinase domain 695 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00056 958 Coils Coil 957 958 - -
Aip09g00056 958 Pfam Leucine rich repeat N-terminal domain 46 68 IPR013210 -
Aip09g00056 958 Pfam Leucine Rich Repeat 99 117 IPR001611 GO:0005515
Aip09g00056 958 SUPERFAMILY RNI-like 259 569 - -
Aip09g00056 958 Gene3D Ribonuclease Inhibitor 30 145 IPR032675 -
Aip09g00056 958 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Aip09g00056 958 SUPERFAMILY Protein kinase-like (PK-like) 695 954 IPR011009 -
Aip09g00056 958 Gene3D Ribonuclease Inhibitor 236 333 IPR032675 -
Aip09g00056 958 Gene3D Ribonuclease Inhibitor 428 506 IPR032675 -
Aip09g00056 958 SUPERFAMILY L domain-like 58 353 - -
Aip09g00056 958 Pfam Leucine rich repeat 197 255 IPR001611 GO:0005515
Aip09g00056 958 Pfam Leucine rich repeat 510 564 IPR001611 GO:0005515
Aip09g00056 958 Gene3D Ribonuclease Inhibitor 507 591 IPR032675 -
Aip09g00056 958 Gene3D Ribonuclease Inhibitor 334 427 IPR032675 -
Aip09g00056 958 PRINTS Leucine-rich repeat signature 99 112 - -
Aip09g00056 958 PRINTS Leucine-rich repeat signature 528 541 - -
Aip09g00056 958 Gene3D Phosphorylase Kinase; domain 1 657 763 - -
Aip09g00056 958 PANTHER F12K21.25 13 955 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00056 Aip-Chr9 497138 500711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00056 149 958 Receptor kinase-like Gene Family AT2G41820 37.634 1.67e-146 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip09g00056 Pkinase 2.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00056 - - adu:107491546 1686.39