Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00052 ATGGAGTCCCCAACGAAGAGCTCACTTCAGCTGGAGACGGCTACAACCACGAATATTACACCCATTTTGAAGATTATTTCAGTTGCATCCGTTGCTGCTGGCATCCAGTTTGGGTGGGCCCTACAACTCTCCCTCCTCACACCATACGTCCAACTGTTGGGGGTCCCACACGTGTGGGCCTCCTTCATTTGGCTGTGTGGTCCCATCTCCGGGATGGTAGTCCAGCCCATTGTGGGATACTACAGTGATCGTTGCAACTCAAGACTCGGCCGCCGTAAACCTTTTATCATCACTGGAGCCCTTTCTGTCATCATCGCCGTCTTTCTCATCGGATACGCTGCTGACCTCGGTCACTCCTTCGGCGATGACATTACGAAGAAAACCCGCCCTCGAGCTGTTGCCATATTCGTCATCGGCTTTTGGGTTCTAGACGTGGCCAACAATATGCTCCAAGGGCCTTGCCGCGCCTTCTTGGGCGACCTGTCTGCCGGAGACGAAGGCAAGATCCGAATGGCCAATGCCTTCTTCTCTTTCTTCATGGCAATAGGTAACATCCTCGGCTACGCGGCAGGTTCATATGAAAATCTACACAAAGCATTTCCGTTCTCGAACACGGAGGCATGCGACAAGTTCTGTGCTAACCTCAAGAGCTGCTTCTTCATCTCCATCCTTCTCCTCCTTACCCTGGCTGGCCTTGCCATGTTCTTCGTTGAAGATGTTCCCCTCTCAGAGGCAAAGAAAAATGAGGACATTGAAGGCACTGAGGACTCTTCTCGTTCGGCAGGATGCTTTGGAGAAATCATTGGGGCGTTGAAGGAGCTAAAGAAGCCAATGTGGATCTTGATGCTTGTAACAGCCATCAACTGGATCGGTTGGTTCCCATTCTTCTTGTTCAACACCGACTGGATGGGGAAGGAGGTGTACGGTGGTAACGTGGGTGACGAGGCCTACGACAAGGGTGTCCGCGCTGGATCGTTGGGTTTGATGATAAACGCTATCGTTTTGGCAGTTATGTCATTGGGAGTTGAACCGGCTAGCAATATCATGGGTGGAGCAAAGAACCTTTGGGGTATTGTTAACTTCATCCTTTCCGGTGGATTGCTTTCTACAATTTACATCACCAAGGTTGCCGAGTTTGACCGCCATCGTGCCGGCCATTATGTTCCTCCAGCTACCGGCGTAAGGGTTGGTGCCATGACTTTTTTCGCCGTCATCGGTATTCCACTTGCGATCAATTTCAGCGTTCCATTCGCTCTAGCATCAGTCTACTCAGCCACCAGTGGAGCAGGCCAAGGCTTGTCTCTTGGGGTTCTCAATCTTGCCATTGTGATCCCACAGATGATAGTGGCAGCAATCAGCGGACCATGGGACAAATTATTTGGAGGTGGTAATTTGCCGGCGTTTGTAGCAGGTGCGGTGGCGGCTGCCGTGAGTAGCATAATGGCATTTTTTATGTTGCCGTCTACGAAGCAATCAGAAGCGGCTAAAGCTGCACTTCCCATGGGCGGTTTCCATTAG 1518 0.5125 MESPTKSSLQLETATTTNITPILKIISVASVAAGIQFGWALQLSLLTPYVQLLGVPHVWASFIWLCGPISGMVVQPIVGYYSDRCNSRLGRRKPFIITGALSVIIAVFLIGYAADLGHSFGDDITKKTRPRAVAIFVIGFWVLDVANNMLQGPCRAFLGDLSAGDEGKIRMANAFFSFFMAIGNILGYAAGSYENLHKAFPFSNTEACDKFCANLKSCFFISILLLLTLAGLAMFFVEDVPLSEAKKNEDIEGTEDSSRSAGCFGEIIGALKELKKPMWILMLVTAINWIGWFPFFLFNTDWMGKEVYGGNVGDEAYDKGVRAGSLGLMINAIVLAVMSLGVEPASNIMGGAKNLWGIVNFILSGGLLSTIYITKVAEFDRHRAGHYVPPATGVRVGAMTFFAVIGIPLAINFSVPFALASVYSATSGAGQGLSLGVLNLAIVIPQMIVAAISGPWDKLFGGGNLPAFVAGAVAAAVSSIMAFFMLPSTKQSEAAKAALPMGGFH 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00052 505 SUPERFAMILY MFS general substrate transporter 26 492 IPR036259 -
Aip09g00052 505 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 1 493 - -
Aip09g00052 505 TIGRFAM GPH_sucrose: sucrose/H+ symporter 21 491 IPR005989 GO:0005887|GO:0008515|GO:0015770
Aip09g00052 505 CDD MFS_SLC45_SUC 25 465 - -
Aip09g00052 505 Pfam MFS/sugar transport protein 37 242 - -
Aip09g00052 505 Gene3D MFS general substrate transporter like domains 23 490 IPR036259 -
Aip09g00052 505 PANTHER SUGAR TRANSPORTER 1 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00052 Aip-Chr9 440858 459238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00052 2 505 Sucrose Transporter Gene Family AT1G71880 60.938 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00052 K15378 - gmx:100782007 665.225