Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00050 ATGAATACATTTTGTCATGTTCCACCGGGTTTTAGGTTCCATCCGACTGATGAAGAGCTCGTTGATTACTACCTTAGAAAAAAAGTTAATTCAACTAGGATTGACCTTGATGTCATCAAAGATGTTGATCTCTACAAAATCGAACCCTGGGATCTTCAAGAGCTATGCAGACTAGGAACAGAAGAGCAAAATGAGTGGTACTTCTTTAGCCATAAAGATAAAAAATATCCAACAGGAACTCGCACAAATAGAGCAACTGCAGCAGGGTTTTGGAAAGCAACAGGGAGGGACAAAGCTATATATTCCAAGCATGATTTGATTGGGATGAGAAAGACTCTCGTCTTCTACAAAGGTCGAGCCCCTAATGGCCTCAAATCTGATTGGATTATGCACGAATATCGTCTTGAAACGGATCAAACTGCGGCTGCTACTCCTCAGGAAGAAGGATGGGTTGTGTGTAGAGTGTTCAAGAAGAGAGTGACTTCCATTATGCGTAAGATGAGTGATCATGATTCCCCTTCTTGCACTTGGTATGATGACTCCTCTTTCATGCACCAACAACCAGATCATCACTTTGACAACTCTTGTTCTTCTTCATCAAAGCACCAACTAATCCCTAATAATAACTGTGATGTCTTCTACCAACAACACAACAACAACAACTTGCCTCTTCATCATCTTCCACTTCTTCATCAAAATAACAATAATCCAATCATGGCACCACCATTTGCTGCTATTAATAATAATGAAACTACTGCTTTTCAAGAACAAGGGAAAAGCTTAATTCATCATCAGGCACTACTCTATGGAAATTTAAATGAAGAGCAAGCTTCTTCTTCAGCTGCTGCTGCTGCTGCTGATTGGAGACTTGTTGACAAGTTTGTTTCATCACAGCTTAGAGAAGATCATCATGTCTCCAAACAAGAATTGATGATGCCAGAAAATACTAATAATAATAATAATGATAATGGTGCCTCAACATCAAACTCAAGCTGTCCAATAATGGACGTGTGGAAATAG 1020 0.3941 MNTFCHVPPGFRFHPTDEELVDYYLRKKVNSTRIDLDVIKDVDLYKIEPWDLQELCRLGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGLKSDWIMHEYRLETDQTAAATPQEEGWVVCRVFKKRVTSIMRKMSDHDSPSCTWYDDSSFMHQQPDHHFDNSCSSSSKHQLIPNNNCDVFYQQHNNNNLPLHHLPLLHQNNNNPIMAPPFAAINNNETTAFQEQGKSLIHHQALLYGNLNEEQASSSAAAAAADWRLVDKFVSSQLREDHHVSKQELMMPENTNNNNNDNGASTSNSSCPIMDVWK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00050 339 MobiDBLite consensus disorder prediction 310 339 - -
Aip09g00050 339 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Aip09g00050 339 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 322 - -
Aip09g00050 339 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 322 - -
Aip09g00050 339 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Aip09g00050 339 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Aip09g00050 339 MobiDBLite consensus disorder prediction 306 339 - -
Aip09g00050 339 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00050 Aip-Chr9 410733 411841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00050 1 334 NAC Transcription Factor Family AT1G62700 47.264 1.03e-114 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip09g00050 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00050 - - aip:107645037 658.677