Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00048 ATGGCAAAGGGTTTGCATCTTTCTCTCTGGCTTGTTCTTGTCTCTGTCATTTCAGTCACATTCAGAGCGGAGAATGTGAGCGCAAGCCCTTCGAATTTCATAAAATCGTCTTGCAGTACGACGACGTTTCCAAACGTGTGTGTGGAGTCTCTGTCCGTGTATGCAAACACGATCCAGCAAGACCCTCACGAGCTGGTCCAAACTGCCCTCACACTCAGCCTGAACAGGAGCCAGTCCACAAGGGCATTTGTGACAAAGTGCAACAAGTTCAGAGGCCTGAAGCCCAGAGAGTACGCGGCCCTCAAGGACTGCGCAGAGGAGATCAGCGACAGCTGTGACAGGCTGAGCAAGTCGCTGAAGGAGCTGAAGCTGTGCAAGGTGAAGGGTGACGATTTCAGATGGCACATCAGCAATGTTGAGACCTGGGTCTCTTCTGCTTTGACTGATGACAGCACCTGCGGTGATGGCTTTGCTGGCAACGCTCTCAATGGCAAGATGAAGGATTCCATCAGGGCTAGAATGGTAAATCTTGCTCAGGTCACTAGCAATGCCTTGTCACTCATCACCCACTATGCTTCACAGTACTAG 588 0.5119 MAKGLHLSLWLVLVSVISVTFRAENVSASPSNFIKSSCSTTTFPNVCVESLSVYANTIQQDPHELVQTALTLSLNRSQSTRAFVTKCNKFRGLKPREYAALKDCAEEISDSCDRLSKSLKELKLCKVKGDDFRWHISNVETWVSSALTDDSTCGDGFAGNALNGKMKDSIRARMVNLAQVTSNALSLITHYASQY 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00048 195 CDD PMEI-like_3 36 193 - -
Aip09g00048 195 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 11 194 - -
Aip09g00048 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 194 - -
Aip09g00048 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 191 IPR035513 -
Aip09g00048 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 191 IPR035513 -
Aip09g00048 195 Pfam Plant invertase/pectin methylesterase inhibitor 32 187 IPR006501 GO:0004857
Aip09g00048 195 SMART PMEI_2 29 187 IPR006501 GO:0004857
Aip09g00048 195 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 191 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00048 Aip-Chr9 389638 390648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00048 24 188 Carbohydrate Esterase AT3G14310 28.571 6.56e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00048 - - gmx:100305900 278.485