Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00040 ATGTCACTTCTTCTTCTTATTGCGACACTCTTGATGGCTACAGTTAAAGTTGCAGTTACATCTTCTTCTGATGCTGTTACGCTGCTTATGAGATTCAAGGACTCCCATGTCTCCTCTGATTCAAACAACTTCCTGGCTGACTGGTCCTCCTCCTCCAAGCCCTGCACGTGGAGGGGCATCACGTGCTCCTCCCAAGGTGAAGTCACATCCATCAACCTCACCGGAGCAGGCCTTGCTGGCACCCTTGACCTCCCAACTCTCACGGCTTTGCCTTCTCTGCACCACCTTGTGTTGCGTGGCAACTACTTCTCCTTAGGGAATCTCTCTGTCTCTTCCTTCTGTGCTCTGCAGACGCTTGATCTTTCCTCCAACAACTTCTCTGGAAACTTCCCCTTCCACCAACTTCTTCCATGTCGAGCTCTCACCTATCTCAACTTGTCAAGGAATCTGATTACTGGCGCCACGGCCACCCCTTTTGGCTTCGCTGCTTCTCTGCTTCAGCTTGACTTGTCCAGGAACCAGGTTTCCCAGCCTGAGATTTTGGCTTACACTCTCTCCAATTGTCAGGCTTTGACTCTGCTTAATTTGTCTGACAACCGAATCTCTGCTCAACTCAGTGAAACTAGTCTTGCTGCTTCTTGTGCCAACCTCACTACTCTGGACCTCTCCCATAATCAGCTCTCCGGGGAGTTGCCGCAGAGTTTCGTGGGGGATTCTTTGGAGCTTTTGGATCTCTCTGGCAACAACTTTTCAGGGATGTTCTCCAGGTTTGGGTTTGGGAGCTGCAGGAACCTTGTTAGGTTGAGTTTATCTCACAATGTGGTCTCTGGTGGAGAGTTTCCAAGCAGCCTGAGGAATTGCCAGGCTCTGGAGACTCTGGATCTTTCTCACAATGACCTTGGACCAAACATTCCTGGGGCTCTTCTTGCAGGTCTCAAGAGCTTGAAGGAACTCTTTTNNNNNNNNGCTTGTGATTCTCTTGTGGTTCTTGATCTCTCTGATAATAAGCTTTCCGGGCCTGTTCCTCTCTCTCTTGCCAATTGCACACAGCTTCAGGTTCTTGACCTCAGTTCCAATGGCTTCACCGGCACCATCCCCTCTGGCTTTTGCTCTTCTTCCTCGCCTCTCGAAAAGATGCTTCTTGCTGACAATTACCTGGAAGGGGTGGTGCCTGCGGAGCTTGGTGGCTGCAAGAGTTTGAGGACAATTGATTTCAGCTTCAACAATTTGAATGGCCCTATACCCTCTCGAGTTTGGTCCCTTCCCAATCTTTCAGACTTGATTATGTGGGCTAACAACCTTACAGGAGAGATTCATGAAGGCATATGCAGCAATGGAGGAAACCTTGAGACCTTGATTCTTAACAACAATTTGATATCAGGCTCCATTCCAAGCTCAATTTCCAATTGCACCAACATGGTTTGGGTCTCACTGGCAAGCAACCGCATTACCGGTGAAATACCTGCCGGAATTGGGAATCTAAAGAAACTTGCCATCCTCCAATTAGGCAACAATTCACTTGCTGGAGGGATCCCACCGGAGCTTGGGAAATGTGAAAGCCTCATATGGTTAGATTTGAATAGTAACAACCTCACTGGTACTATCCCCTCTGATCTTGCCAATCAAGCTGGCTTGGTTATGCCAGGAACTGTTTCTGGGAAGCAGTTTGCATTTGTGAGAAATGAAGGTGGGACAAGCTGCAGGGGAGCCGGAGGTTTGGTCGAATTCGAAGATATCAAGGCTGCAAGGCTTGAGAGTTTTCCTATGGTGCATTCCTGTCCATTAACTCGAATATACTCCGGCGTCACGGTCCTGAATCTGGGACACAATAAGCTGATTGGGAACATTCCAGAGAGCTTTGGTGGTCTAAAAGCAATAGGAGTGCTTGATCTCTCCCATAATAACCTTCAAGGACTCATCCCTGCTTCATTAGGAGCTCTATCTTTTCTGAGTGATCTTGATGTCTCCAATAATAACCTCACAGGCACCATTCCCACCGGTGGTCAGCTAACAACTTTCCCTTCTTCTAGATACGAAAACAACTCTAATCTTTGTGGTGTTCCTTTGCCACCTTGCCACGGAGCTTTGAATCGGAATCATGCAGCAGGTTTCCATGCTTGGAAGAAGAAGCAACCTATTGTGACCGGGATTGTGATTGGCCTTGTTTTCTTTGTGTTGTTTTTTGTTGCCTTTGTTCTTGCTTTGTATCAAGTGAAGAAGTACCATTGGAAGGAGGAACAGAGAGAAAAGTACATAGAAAGTCTTCCAACTTCAGGTAGCAGCAGTTGGAAACTATCAAGCATTCCTGAGCCTCTCAGCATCAATGTTGCCACCTTTGAGAAACCACTGCGAAAGTTGACATTCGCGCATCTTCTCGAGGCTACTAACGGTTTCAGTGCCGAAACCTTGATAGGGTCTGGTGGTTTTGGTGAAGTCTACAAGGCTAAGCTGAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTTATTCATGTAACAGGCCAGGGAGACAGAGAGTTCATGGCTGAAATGGAAACCATTGGAAAGATTAAGCACAGAAACCTTGTTCCACTGCTGGGTTACTGTAAAATTGGAGAGGAGAGGCTTCTTGTGTATGAGTACATGAAATGGGGAAGTCTAGAGGCTGTTCTTCATGATCGTGCCAGATCGAAGCTTGATTGGGGAGCAAGAAAGAAGATTGCCATAGGGTCAGCAAGAGGACTTGCATTTCTACACCATAGTTGTATTCCTCATATTATACACCGGGACATGAAGTCCAGCAACATTCTTCTTGATGAAAATTTTGAGGCTAGAGTTTCAGATTTTGGCATGGCAAGATTGGTTAATGCCCTGGACACTCATCTCAGTGTGAGCACACTTGCTGGAACACCAGGTTATGTACCTCCTGAGTACTATCAGAGTTTTAGGTGCACAACAAAGGGTGATGTCTATAGTTATGGTGTCATACTTCTAGAGCTTTTATCCGGGAAGAGGCCGATCGACTCGTCGGAGTTTGGCGATGACAACAATCTGGTTGGATGGTGTAAGCAACTTCACAAAGAGAAAAGAAGTAGTGAAATTCTAGATCCTCACTTAATCAAGCAAGCATCCAGTGAAGGTGAACTCTACCAGTGTTTGAGAATTGCCTTTGAGTGTTTAGATGAGAGACCGTATAGGAGACCAACTATGATTCAAGTCATGGCAATGTTTAAGGAGATTCAAGCTGATACAGATAATGATGTCCTTGATGCCTTCTCTATGAAATGCAATGTCATTAAGGAATCATAA 3285 0.4612 MSLLLLIATLLMATVKVAVTSSSDAVTLLMRFKDSHVSSDSNNFLADWSSSSKPCTWRGITCSSQGEVTSINLTGAGLAGTLDLPTLTALPSLHHLVLRGNYFSLGNLSVSSFCALQTLDLSSNNFSGNFPFHQLLPCRALTYLNLSRNLITGATATPFGFAASLLQLDLSRNQVSQPEILAYTLSNCQALTLLNLSDNRISAQLSETSLAASCANLTTLDLSHNQLSGELPQSFVGDSLELLDLSGNNFSGMFSRFGFGSCRNLVRLSLSHNVVSGGEFPSSLRNCQALETLDLSHNDLGPNIPGALLAGLKSLKELFXXXACDSLVVLDLSDNKLSGPVPLSLANCTQLQVLDLSSNGFTGTIPSGFCSSSSPLEKMLLADNYLEGVVPAELGGCKSLRTIDFSFNNLNGPIPSRVWSLPNLSDLIMWANNLTGEIHEGICSNGGNLETLILNNNLISGSIPSSISNCTNMVWVSLASNRITGEIPAGIGNLKKLAILQLGNNSLAGGIPPELGKCESLIWLDLNSNNLTGTIPSDLANQAGLVMPGTVSGKQFAFVRNEGGTSCRGAGGLVEFEDIKAARLESFPMVHSCPLTRIYSGVTVLNLGHNKLIGNIPESFGGLKAIGVLDLSHNNLQGLIPASLGALSFLSDLDVSNNNLTGTIPTGGQLTTFPSSRYENNSNLCGVPLPPCHGALNRNHAAGFHAWKKKQPIVTGIVIGLVFFVLFFVAFVLALYQVKKYHWKEEQREKYIESLPTSGSSSWKLSSIPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETLIGSGGFGEVYKAKLKDGCVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLEAVLHDRARSKLDWGARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWCKQLHKEKRSSEILDPHLIKQASSEGELYQCLRIAFECLDERPYRRPTMIQVMAMFKEIQADTDNDVLDAFSMKCNVIKES 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00040 1094 SMART serkin_6 798 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00040 1094 ProSitePatterns Protein kinases ATP-binding region signature. 804 827 IPR017441 GO:0005524
Aip09g00040 1094 Pfam Leucine Rich Repeat 350 370 IPR001611 GO:0005515
Aip09g00040 1094 Pfam Leucine Rich repeat 287 302 IPR001611 GO:0005515
Aip09g00040 1094 Pfam Leucine Rich repeat 213 230 IPR001611 GO:0005515
Aip09g00040 1094 Pfam Brassinosteroid receptor island domain 544 604 IPR045381 -
Aip09g00040 1094 SUPERFAMILY L domain-like 323 691 - -
Aip09g00040 1094 Pfam Protein kinase domain 800 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00040 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 918 930 IPR008271 GO:0004672|GO:0006468
Aip09g00040 1094 Gene3D Ribonuclease Inhibitor 17 700 IPR032675 -
Aip09g00040 1094 SUPERFAMILY RNI-like 70 368 - -
Aip09g00040 1094 Gene3D Phosphorylase Kinase; domain 1 761 873 - -
Aip09g00040 1094 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 6 308 - -
Aip09g00040 1094 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 603 1087 - -
Aip09g00040 1094 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 325 563 - -
Aip09g00040 1094 SMART LRR_typ_2 447 470 IPR003591 -
Aip09g00040 1094 SMART LRR_typ_2 348 372 IPR003591 -
Aip09g00040 1094 SMART LRR_typ_2 623 646 IPR003591 -
Aip09g00040 1094 SMART LRR_typ_2 421 445 IPR003591 -
Aip09g00040 1094 SMART LRR_typ_2 494 518 IPR003591 -
Aip09g00040 1094 SMART LRR_typ_2 287 311 IPR003591 -
Aip09g00040 1094 SMART LRR_typ_2 214 237 IPR003591 -
Aip09g00040 1094 SMART LRR_typ_2 647 670 IPR003591 -
Aip09g00040 1094 PANTHER UNNAMED PRODUCT 603 1087 - -
Aip09g00040 1094 PANTHER UNNAMED PRODUCT 325 563 - -
Aip09g00040 1094 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Aip09g00040 1094 PRINTS Leucine-rich repeat signature 217 230 - -
Aip09g00040 1094 PRINTS Leucine-rich repeat signature 623 636 - -
Aip09g00040 1094 PANTHER UNNAMED PRODUCT 6 308 - -
Aip09g00040 1094 SUPERFAMILY Protein kinase-like (PK-like) 779 1069 IPR011009 -
Aip09g00040 1094 Gene3D Transferase(Phosphotransferase) domain 1 874 1090 - -
Aip09g00040 1094 ProSiteProfiles Protein kinase domain profile. 798 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00040 1094 Pfam Leucine rich repeat 140 201 IPR001611 GO:0005515
Aip09g00040 1094 Pfam Leucine rich repeat 601 660 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00040 Aip-Chr9 335966 339504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00040 16 1087 Receptor kinase-like Gene Family AT1G55610 59.391 0.0 1345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Aip09g00040 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00040 - - cit:102619977 1276.15