Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00039 ATGGCTGGGATTGATGAAAATGTTGGGGTCCCCGGGGATTGGAGTGGTCCTAGCCCAAGTCCCAGAACCTTTTTCTCTGTAATGTTAGGGGAGGATAATGTAGCAAGATCAATGTCAGACCCTCCTCCAGGTGGTGATGGAGCACAAGATGGTGATCAGAAGTTGGTGTCACGGGGTGGTCTTGTTGAGAGGATGGCAGCTAGAGCAGGGTTCAATGCACCCAGGTTGAACACTGACACCATTAGATCTACTGACCTTTCACTCAATTCTGATGTTCCTTCTCCATACTTGACCATACCACCTGGTCTCAGTCCTACCACCCTTTTAGATTCTCCGGTCTTCCTTACAAATTCACTGGCACAGCCATCTCCAACAACTGGAAAGTTTCCATTCATCTCAAACGGCAACATATCATCCAATGCTCCTGAAAGATGCAAAGATAACAGCTTTGATGATATTTATGCATCATCCTTTGCATTTAAGCCTACGACAGATTTCGGCTCCTCTTTTTATCAAGGCGCTGCCAGAAAAATGAATCCTACTACAATAGCTCAACAATCTCTTCCTGGTGTTGAGGCCCCTGTTCAGTCGGAACATTTTTTTCAATCGCGAAGTGCTGATGTAGTAAAATCTCAAACTCAGAATAAAAATGGCCTCCATCTTCAGCCAGACTTTATTGAGTCATCTCCTCAACAGGATACTGTCGGTGTTAGCGTTGAGCATTCGCCACAACTTGAAGAGCAAGCAGATGAAGAGGGAGAGCCAAGAGGGAATGGTGACTCAGTGGCTGCTGGTTTTGGTGGTGCACCATCTGAAGATGGATATAATTGGAGAAAATATGGCCAGAAGCAAGTTAAGGGTAGCGAGTACCCACGAAGTTACTACAAGTGTACACATCCAAATTGTCCTGTGAAAAAGAAAGTAGAACGATCTCATGAAGGCCACATAACAGAGATCATCTATAAGGGAGCACACAACCATCCTAAACCTCCTCCGAATCGCCGCTCAGGAATAGCTTCGGCCAATCCTCCAAGTGACATGCAAATGGACAATCCGGAGCATGTTGAACGACAAAGTGGCAGCGACGGAGAGCTGGGCTGGGCTAATTTACAGAAGGGGAATGTAGCTGGAGCTGCTAATTGGAAGAATGACAACCTTGAAGTGACATCATCAACATCTGTTGCCCCCGAGTATTGTAACCAGTCCACCAATTCACAGGCTCAAAATGGTACTCAGTTTGACTCGGGAGATGCGGTGGATGCATCTTCTACTTTTTCTAATGAAGATGATGATGATGATCGAGGTACTCATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCAGAATCTAAAAGAAGGAAACTGGAATCATATGCAACAGAGTTGAGTGGAGCTACTAGAGCTATTCGCGAACCTAGAGTTGTTGTACAAACTACCAGCGAAGTAGACATCCTTGACGATGGTTATCGGTGGAGGAAATATGGGCAGAAGGTTGTCAAAGGAAATCCCAACCCGAGGAGTTACTACAAGTGCACAAATGCAGGCTGCACTGTGAGGAAACACGTTGAGAGAGCATCACATGACCTTAAATCTGTAATCACTACATACGAGGGCAAGCACAACCATGATGTTCCTGCCGCACGCTCTAGCAGTCATGTCAATGCTAATGCTTCTGGCAGTGTTCCCGGGCAAGCAGCACCTGGCGTTCTGCAACCCCATGTTCACAGACCTGAACCAACTCAAGTTCCCGGTGGCATTGGAAGGCTTGAGAGGCCTCCTGCCCTCGGTGCATTCAACCTATCGGGGAGGCAGCAGCTAGGACCTCCACATGGCTTCTCCTTTGGAATGAATCAACCTCTTCTGCCGAACTTGGCGATGCCTGGATTCGGCCCCGGGCAAGCAAAGCTTCCTGTGATGCCGGTTCATCCATTCTTGGCAACGCAACAACAACGTCCTCCTAATGAGATGGGGTTCATGTTGCCCAAGGGTGAACCAAATGTGGAGCCTATTCCTGAGCGTCATAACCTGCCCAGTGGCTCATATCAAGATCTCATGAGTCGCATGCCCCTTGGACCTCACATGTGA 2094 0.4752 MAGIDENVGVPGDWSGPSPSPRTFFSVMLGEDNVARSMSDPPPGGDGAQDGDQKLVSRGGLVERMAARAGFNAPRLNTDTIRSTDLSLNSDVPSPYLTIPPGLSPTTLLDSPVFLTNSLAQPSPTTGKFPFISNGNISSNAPERCKDNSFDDIYASSFAFKPTTDFGSSFYQGAARKMNPTTIAQQSLPGVEAPVQSEHFFQSRSADVVKSQTQNKNGLHLQPDFIESSPQQDTVGVSVEHSPQLEEQADEEGEPRGNGDSVAAGFGGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSHEGHITEIIYKGAHNHPKPPPNRRSGIASANPPSDMQMDNPEHVERQSGSDGELGWANLQKGNVAGAANWKNDNLEVTSSTSVAPEYCNQSTNSQAQNGTQFDSGDAVDASSTFSNEDDDDDRGTHGSVSLGYDGEGDESESKRRKLESYATELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHVNANASGSVPGQAAPGVLQPHVHRPEPTQVPGGIGRLERPPALGAFNLSGRQQLGPPHGFSFGMNQPLLPNLAMPGFGPGQAKLPVMPVHPFLATQQQRPPNEMGFMLPKGEPNVEPIPERHNLPSGSYQDLMSRMPLGPHM 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00039 697 SMART WRKY_cls 271 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00039 697 SMART WRKY_cls 488 547 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00039 697 SUPERFAMILY WRKY DNA-binding domain 270 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip09g00039 697 MobiDBLite consensus disorder prediction 400 423 - -
Aip09g00039 697 SUPERFAMILY WRKY DNA-binding domain 480 548 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip09g00039 697 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 75 585 - -
Aip09g00039 697 ProSiteProfiles WRKY domain profile. 272 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00039 697 MobiDBLite consensus disorder prediction 400 457 - -
Aip09g00039 697 ProSiteProfiles WRKY domain profile. 483 548 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00039 697 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 75 585 IPR044810 GO:0003700
Aip09g00039 697 MobiDBLite consensus disorder prediction 1 56 - -
Aip09g00039 697 Gene3D WRKY domain 262 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip09g00039 697 Pfam WRKY DNA -binding domain 272 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00039 697 Pfam WRKY DNA -binding domain 489 545 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00039 697 MobiDBLite consensus disorder prediction 220 278 - -
Aip09g00039 697 MobiDBLite consensus disorder prediction 220 241 - -
Aip09g00039 697 MobiDBLite consensus disorder prediction 666 697 - -
Aip09g00039 697 MobiDBLite consensus disorder prediction 320 368 - -
Aip09g00039 697 Gene3D WRKY domain 475 541 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00039 Aip-Chr9 327363 330968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00039 1 692 WRKY Transcription Factor Family AT5G56270 52.044 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip09g00039 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00039 K18835 - gmx:100127395 1062.75