Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00023 ATGGAGGCTTCTTCCAGTACATGTGAGATAGTGGAGTCAAGCGAAGATATTATTTCTGAGTTCAAAGTGGCTGAAAAACCTGAGTGTAGTTATGCCAACAAATCAGGGAAAAAGTATTCTATCGAGGATGATATTAATCGTCTTTTCCAGGGTATTGACATTCAAAGTTCATCTAGAGGTCTTGGTGCATCACGCTCACACAAGAGTGCTCTTAAGAGGCCAATAAAAGTTAGTTCAGCTCAGGCCTCAGGAATCGGCATCTCCGAATCTGTTAGTTTGAAGCAGGCATTTAGAGGCTTGTGCATTTCTCAGGCGTCGGAAATGGCTGCTTTGAAGAGACTCTCAAAGCCATGCAGTTCGTCACGAGTATCAGAGGCTGGCAACATCAAAAAGTTATACACAGCAGTTGTAGATGAGGGCAAACAGAACTTGCTGGAAATCTCCCTGGTGCCAGAGGCATCTGCCCATTCTGATAAATTGCCCAGGGTCTCGATATCCATATCAAATTCAAGTGCTAATCATTCTGTTCCCTTGGCTGATGCCACAAACCTGAAAGAAACTACAACCAGGCTTGCTTCTCGAGATCAGATTGTTCCTCTTCCATCAGAAGTTGAAGGTGAAAAACCGACAATTGCAAATTTTTCACCGACTGCTTGTGCAAATGAGATTGTGCTGGAGGGCAGAATGGATCCTGCTGCTGCTCACAGTTTTTCAATGGCAGATAAGGGACACAAAGCAAATATACTTTGTGTGTCTTCTCCTTCCTGCTCTAGTACTGGTGATGGAGTGGATAAACCCACAAGCAGCCATACATGTTTAGCAAAGTCAATAGTCAGTAGCAAGAACTTCTTTAAGAAAAAAGTAAAGCAAGATGTTTGTTCTGCCTCAAGCAGCTCCACTCCATGCCTGAGAAAAGTTGACAACAATTTGGGATCGATTGCAAATACTTTGGACAAAGAAACAGACAATTCTGATTTGAAGCATGAAACAAAAGGAAACCAAAAGCTGTCTCCCAGCAGTTCAAACGGTAGCATTGAAATTAACTCAATCAATTCTGAGAAGGACTCATGCAAACCTGGTTTCACGTTAAATTGCAACAAGAGAACCAAATTTCAAGTGACAAAAGTTGATGAGAAATCAAGATCAAAGGAAAAGGGTGAGTTCTCCCAAAGCTCAAAAAGTAGCATTGGTGAGTATAGTAGTAGCACAAGCATCAGCGAGGAGAGCAATCTAAGTGGTTCCAGTCGCATTGGCTACAGGCCTCATATGTCAAAACATCTGAGATGGGAAGCTATTCGAGCTGTTCAGCAGCATGGTAATTTAAGTTTGAGGCACTTTAAGCTGCTAAGGAAGCTTGGTAGCGGGGATATTGGAACTGTTTATCTTGCAGAACTAATTGGGACAAACTGCCTTTTTGCCTTAAAGGTGATGGACAATGAATTCTTGGCAAGCCGGAAGAAAATGTTCAGGGCTCAAACTGAACGAGAGATCCTACAGATGCTGGATCATCCATTTTTTCCTACCCTATATTCCCATATCTCCACAGATAAGCTTTCTTGCTTGGTCATGGAGTATTGTCCAGGTGGTGATCTGCATGTATTACGGCAGAGGCAGCCATATCGGAGTTTCTCAGAACAAGCAGCTAGAAGTGCAGTTGTAATTCGTTGTAGCATTCATCGACTCTGGTTATGCTGGCTCATTCTCAGGTTTTATGTTGCTGAGGTTCTTCTTGCCTTGGAGTACTTGCACATGCTGGGAGTTGTATATCGAGATCTAAAGCCAGAAAATATCCTAGTGAGAGAAGATGGCCACATTATGCTGACAGATTTTGACTTGTCACTGAGATGTTCCGTGAATCCAACGCTAGTGAAATCATCTTCTCCGGAGGAGGTGGATGGAACAAGAAAAATGTCAAGTCCATGCTCAGATGCCAGCTGCATTCAGCCTTTCTGTCTCCAACCTGATTGGCAAGTCTCCTGCTTTACTCCCATTTTAATATCTGGCGGAGCGAAATCTCGAAAAACAAAGGCTGATGCTCAGGTTGGTCCACTGCCACAGCTCGTGGTGGAGCCTATTAGCGCTCGATCTAACTCCTTTGTTGGAACCTATGAATATCTTGCTCCGGAGATCATCAAAGGTGAGGGTCACGGGAGTGCTGTGGATTGGTGGACTTTCGGTATATTTTTGTTTGAGCTTTTGTATGGTAGGACTCCCTTCAAGGGCCAATCAAACGAGGATACGTTATCCAACGTTGTGTCGCAAAGCCTTAAGTTCCCAGGCGCTCCTATTGTCAGTTTCCATGCTAGAGATTTGATCAGAGGATTGTTGATAAAGGATCCTGAAACTCGGTTAGGTTCTGTCAAAGGAGCTGCTGAAATAAAGCAGCATCCCTTCTTTGAAGGACTGAACTGGGCTCTAATACGATGTGCAGCGCCACCAGAGCTCCCCAAATTTCGTGATTTCGGAAGTCGTGCTCCATCTATGGCTGCTCAGAAGGAGAATGCAAACGATTTAGAGGACACAGAAGATTGTGAGGAGTTTGAGTTGTTTTAG 2553 0.4383 MEASSSTCEIVESSEDIISEFKVAEKPECSYANKSGKKYSIEDDINRLFQGIDIQSSSRGLGASRSHKSALKRPIKVSSAQASGIGISESVSLKQAFRGLCISQASEMAALKRLSKPCSSSRVSEAGNIKKLYTAVVDEGKQNLLEISLVPEASAHSDKLPRVSISISNSSANHSVPLADATNLKETTTRLASRDQIVPLPSEVEGEKPTIANFSPTACANEIVLEGRMDPAAAHSFSMADKGHKANILCVSSPSCSSTGDGVDKPTSSHTCLAKSIVSSKNFFKKKVKQDVCSASSSSTPCLRKVDNNLGSIANTLDKETDNSDLKHETKGNQKLSPSSSNGSIEINSINSEKDSCKPGFTLNCNKRTKFQVTKVDEKSRSKEKGEFSQSSKSSIGEYSSSTSISEESNLSGSSRIGYRPHMSKHLRWEAIRAVQQHGNLSLRHFKLLRKLGSGDIGTVYLAELIGTNCLFALKVMDNEFLASRKKMFRAQTEREILQMLDHPFFPTLYSHISTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQAARSAVVIRCSIHRLWLCWLILRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLVKSSSPEEVDGTRKMSSPCSDASCIQPFCLQPDWQVSCFTPILISGGAKSRKTKADAQVGPLPQLVVEPISARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGRTPFKGQSNEDTLSNVVSQSLKFPGAPIVSFHARDLIRGLLIKDPETRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGSRAPSMAAQKENANDLEDTEDCEEFELF 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00023 850 MobiDBLite consensus disorder prediction 316 351 - -
Aip09g00023 850 MobiDBLite consensus disorder prediction 389 417 - -
Aip09g00023 850 PANTHER FLIPPASE KINASE 1-RELATED 1 850 - -
Aip09g00023 850 SMART serkin_6 446 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00023 850 Pfam Protein kinase domain 696 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00023 850 Pfam Protein kinase domain 447 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00023 850 MobiDBLite consensus disorder prediction 374 417 - -
Aip09g00023 850 Gene3D Phosphorylase Kinase; domain 1 439 557 - -
Aip09g00023 850 ProSiteProfiles Protein kinase domain profile. 446 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00023 850 MobiDBLite consensus disorder prediction 333 351 - -
Aip09g00023 850 CDD STKc_phototropin_like 444 822 - -
Aip09g00023 850 Gene3D Transferase(Phosphotransferase) domain 1 569 615 - -
Aip09g00023 850 MobiDBLite consensus disorder prediction 374 388 - -
Aip09g00023 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Aip09g00023 850 Gene3D Transferase(Phosphotransferase) domain 1 694 817 - -
Aip09g00023 850 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 850 - -
Aip09g00023 850 SUPERFAMILY Protein kinase-like (PK-like) 428 818 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00023 Aip-Chr9 232778 236287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00023 373 850 AGC Kinase Gene Family AT3G52890 64.300 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip09g00023 Pkinase 3.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00023 - - adu:107491511 1571.6