Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03378 ATGCCTTCACGAACGGATACTGATCGAGGATCTTTTGAGAGCATAGTCCTTTCAACGCAAGCATTATCAACCACAACTTTACAAGCTTCCGTCAATGGTGGGAAGTGTCACTGTCAGCATTGCAAGGTAGATATGGAGTTCTCGAATTCTCTCGAAATCTTTCGTTCTCTCCAGATTCTTTCAGCGTTCGGAGTGTTATCAAGTCCACAACAACCCAAGTACATGGTTGATTTGGAAATCCAGGTCCCAACCCCCTTCGACCCTTTCGCCGAGGCCAAAGAATCGGATGCCCCCGGGGCAAAGGAGTATGTCCATATCCGCATCCAGCAAAGGAATGGGAAGAAGAGCCTGACCACAGTGCAAGGGCTGAAGAAGGAGTTCAGCTACGAGAAAATCCTCAAAGACCTTAAGAAAGAGTTCTGCTGCAACGGCAATGTCGTTCAGGACAAAGAGCTTGGCAAAATAATACAGCTCCAAGGGGATCAGCGCAAGAACGTTTCTCAGTTTCTGGTTCAGGTTGGTTTGGTGAGGAAGGACCAAATCAAGATTCATGGTTTTTGA 561 0.4706 MPSRTDTDRGSFESIVLSTQALSTTTLQASVNGGKCHCQHCKVDMEFSNSLEIFRSLQILSAFGVLSSPQQPKYMVDLEIQVPTPFDPFAEAKESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQVGLVRKDQIKIHGF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03378 186 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 75 186 - -
Aip08g03378 186 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 75 186 - -
Aip08g03378 186 CDD eIF1_SUI1 102 185 IPR005874 GO:0003743
Aip08g03378 186 Pfam Translation initiation factor SUI1 101 174 IPR001950 GO:0003743|GO:0006413
Aip08g03378 186 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 79 186 IPR005874 GO:0003743
Aip08g03378 186 ProSiteProfiles Translation initiation factor SUI1 family profile. 104 174 IPR001950 GO:0003743|GO:0006413
Aip08g03378 186 SUPERFAMILY eIF1-like 72 186 IPR036877 GO:0003743|GO:0006413
Aip08g03378 186 Gene3D - 67 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03378 Aip-Chr8 125029812 125033591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03378 75 186 Eukaryotic Initiation Factors Gene Family AT5G54940 84.821 2.77e-69 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03378 K03113 - gmx:100787664 221.861