Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03377 ATGTTGAGTGGAACCACAAAGAACAATCTAAGATGTAGCATTCGACTTCGATTCGTCGACGTCTCGAATAACAGGCTAATGGGGGGCTTGCCTGATTGCCTGATCCGAACCGGACCCGAAAATGATAGAGTTGTTAAGAGTGATGGAAATTGTTTGTCTGGGAATTTTCAGCATCAACATGCATTGTCATATTGCAAAGAAGTTCCTCAATTGAAGAAGGAATCACATAAAGTTGGAGCATTATTTGTTGTTGGTGTAATTGTTGGAATTCTTGTTATGGTTATGGTTTTTGTTTTGTGCATTGTTATAGTTTGTAAAAGGTATTATTCAAAAGGGGTATCAGAACAGCACCTATTGCATAAATCAGTTCAAGATAGCTACTCAGCAAGTTTGTCATCTGAAATTGTGACAAATGCAAGGTATGTTTCTGAAGCTGCAAAGTTTGGCAGAGAAGGCCTTCCCTTGTGTAGGTCATATTCTTTGGAAGAGTTGAAGGAAGCTACAAATAACTTTGACAACCCTAATTTTATGGGTGAAAATTTATATGGGAAGCTTTACAGAGGAAAATTAGAGAGTGGAATACAAGTTGTGATAAGGTGTTTGCCTTTGTCAAAAAAATACACAATTAGGAACTTCAAACTCAGGTTGGATTTGCTTGCAAAGCTTAGGCACCCTCATTTAGTGTCTCTCTTGGGACATTGCATTGATGGTGTTGTTGGAGATCAAAGTGACACAAATGTCTTCCTTGTTTATGAATTTGTCTCAAATGGGAGCTTTCAGACCTATCTCTCAGAAGACAGTGGTGGAAAGATTTATGATTGGTCAGAGAGATTATCGGTGCTAATTAGTATTGCCAAGGCTGTTCACTTCTTACACACTGGAATGATACCCGGCTTCTTTAAGAACAGACTTAAGACTAATAATATATTGATTAATGAACATTGGATGGCAAAGTTGAGTGACTATGGATTGTCTATTATCTCTGAAGAAACTGATGCTTGTGGGGTAAATGGAGAAAGTCCTGATTCAATGCAAATGAAAAGGTTAGAGGATGATGTCTATAGCTTTGGATTCATAATACTTGAGGCACTTGTTGGACCTTCACTATCTGCTAAAAGAGAAGCACTTATGCTCCATGAAAGGGGATCATTCAATAGTCAAGATGGGTGGAAACAGATTGTGGATCCAATAGTGATGTCAACTTGTTCTAAAGAATCTCTATCCATTGTGATATCTATATCCAACAAATGCATTTCTCCTGAGTCATGGAGCAGACCATCCATTGAAGATGTCCTTTGGAACTTGCAATATGCTTCTCAAGTTCAGGCAACTGCTGATGGGGTTTAG 1347 0.3838 MLSGTTKNNLRCSIRLRFVDVSNNRLMGGLPDCLIRTGPENDRVVKSDGNCLSGNFQHQHALSYCKEVPQLKKESHKVGALFVVGVIVGILVMVMVFVLCIVIVCKRYYSKGVSEQHLLHKSVQDSYSASLSSEIVTNARYVSEAAKFGREGLPLCRSYSLEELKEATNNFDNPNFMGENLYGKLYRGKLESGIQVVIRCLPLSKKYTIRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGDQSDTNVFLVYEFVSNGSFQTYLSEDSGGKIYDWSERLSVLISIAKAVHFLHTGMIPGFFKNRLKTNNILINEHWMAKLSDYGLSIISEETDACGVNGESPDSMQMKRLEDDVYSFGFIILEALVGPSLSAKREALMLHERGSFNSQDGWKQIVDPIVMSTCSKESLSIVISISNKCISPESWSRPSIEDVLWNLQYASQVQATADGV 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03377 448 PANTHER OS07G0166700 PROTEIN 1 447 IPR045272 GO:0004714|GO:0006468
Aip08g03377 448 Pfam Protein tyrosine and serine/threonine kinase 177 430 IPR001245 GO:0004672|GO:0006468
Aip08g03377 448 Gene3D Phosphorylase Kinase; domain 1 132 253 - -
Aip08g03377 448 PANTHER BNAA09G06560D PROTEIN 1 447 - -
Aip08g03377 448 SUPERFAMILY Protein kinase-like (PK-like) 154 436 IPR011009 -
Aip08g03377 448 Gene3D Transferase(Phosphotransferase) domain 1 254 446 - -
Aip08g03377 448 ProSiteProfiles Protein kinase domain profile. 171 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03377 Aip-Chr8 125015366 125022101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03377 2 447 Miscellaneous Gene Families AT5G63410 54.409 1.63e-165 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Aip08g03377 PK_Tyr_Ser-Thr 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03377 - - adu:107463496 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03377 08 125015366 125022101 Aip08g03377 08 125015366 125022101 ECH