Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03366 ATGGAGGGTTTGCTTGCCCACATCTTATCCACTAGTGAAGCTAATAGAAGGAATGCTAATAAAGTGGTTCTGTATAAGGATGCAGCAAAGAAACAACTGCTGGAGTTTATTTCTGCTCTTCGTGGTTGTGAACTAATAAGATGTTCCAGCGAATTAAAGCCTGTACCTTCTAGGCGCTCATCAAAGAGGAACAGAGCAGCAAAAAGAAGAAGGAGTAGGATCAATGAAAAAATGAAGGCCTTGCAACATCTAAGTCCTAATTCTATCAAGACAGATCTTCTTTTGATCGACTCCGTCAACAGATATACAAGCTTGAATTGGAGCAAAAGAGATTAG 336 0.3988 MEGLLAHILSTSEANRRNANKVVLYKDAAKKQLLEFISALRGCELIRCSSELKPVPSRRSSKRNRAAKRRRSRINEKMKALQHLSPNSIKTDLLLIDSVNRYTSLNWSKRD 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03366 111 MobiDBLite consensus disorder prediction 54 81 - -
Aip08g03366 111 Coils Coil 64 84 - -
Aip08g03366 111 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 57 88 IPR036638 GO:0046983
Aip08g03366 111 Gene3D - 50 106 IPR036638 GO:0046983
Aip08g03366 111 PANTHER TRANSCRIPTION FACTOR SPATULA 43 92 - -
Aip08g03366 111 MobiDBLite consensus disorder prediction 59 76 - -
Aip08g03366 111 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 43 92 IPR031066 -
Aip08g03366 111 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 111 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03366 Aip-Chr8 124959619 124960723 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03366 58 92 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 68.571 2.88e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03366 K08737 - pop:112326168 75.8701