Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip08g03351 | ATGGGAAACCAAAATAGTACTCATCAACATCAAATAGAGATTGAGAACTTATGGTCCTTCCAACGCCGCGAGGTGGAACAGGCCAGCGACTTCAAAAGCGGCCTGTTCTCCCTCGATCGCGTTAGGAAGATGATGAAGGTCGAAGAAGACGTTGATCGGATCTCGGCCGAGGTGCCGGTTGTCTTGGCCAAGGCATGTGATCTCTTCATCCGTAATGTCACCCTCCAATCATGGCACCAAGCCCAGAAAAATAAGCGTTCTATCATCCAAGGCCAAGACATCAACTCCACCATGAATTCCTTTAGGGATGCTTGCCATAACATTGAATATTTTAAGAGATTAATGAGCGCATCTTAG | 357 | 0.4678 | MGNQNSTHQHQIEIENLWSFQRREVEQASDFKSGLFSLDRVRKMMKVEEDVDRISAEVPVVLAKACDLFIRNVTLQSWHQAQKNKRSIIQGQDINSTMNSFRDACHNIEYFKRLMSAS | 118 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip08g03351 | 118 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA | 5 | 97 | IPR027170 | GO:0003700|GO:0006355|GO:0016602 | |
Aip08g03351 | 118 | Gene3D | Histone, subunit A | 1 | 104 | IPR009072 | GO:0046982 | |
Aip08g03351 | 118 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 5 | 97 | - | - | |
Aip08g03351 | 118 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 39 | 96 | IPR003958 | - | |
Aip08g03351 | 118 | SUPERFAMILY | Histone-fold | 21 | 99 | IPR009072 | GO:0046982 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip08g03351 | Aip-Chr8 | 124791012 | 124791405 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip08g03351 | 17 | 99 | CCAAT-HAP5 Transcription Factor Family | AT5G63470 | 46.988 | 1.49e-24 | 92.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YC | Aip08g03351 | CBFD_NFYB_HMF | 4.1e-13 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip08g03351 | - | K08066 | adu:107463451 | 215.698 |