Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03349 ATGGAATGTAATAAAGACGACGCCATAAAGGCTAAAGAGCTTGCCGAGAAGACGCTACTTGAGAGGGACCTAAGCAGTGCAAAGATATTTGCAAAGAAGGCGCAAGACATGTATCCTAATCTTGATGGCCTTCGTCAATTGCTGGCCACTATTGAGGTGTATGCTTCGGCTGAAAAAAAGGTTAATGGTGAAGTTGATTGGTACAGGGTCCTTGGTGTTGAACCAATGGCAGATGACCAAACAATTCGAAGACATTACAGGAAACTGGCTCTTATTCTGCACCCTGATAAAAATAAATCGGTAGGGGCAGACGAGGCATTTAATCTTATCACACAGGCATGGACTTGTTTGTCTGATAATGCCAAGAGAGTCGAGTATGACCAAAAGCGCAACTTCTCTGGCATATATTGTGGGAAACCATCTGCACCAGCTCGTCCGAGTGGTTTCTTTGGTAACTTAAATGCTGCTAACTGGAAGAATAGAGATCAAGGGAGTGCTACACATCAAACTCAAACTACAAGACCTCCCACGTCAATGAACCCGACATTTTGGACCATGTGCTTGTCCTGCAGGACAAAGTTTGAGTACAATGCTCATTTTGTCAACTGCAAACTTACCTGCTTCAACTGCAACAAGACCTTTGTAGCTTCTGAGGCATCGCCCCCACGTGTATATAGAAATGCTTCATCTACTTCAAGCATTTCTCAGATGAACCAAAATAACCTTAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCTGGTGGCATTTCGAGAATGCCGTCATTTTCTACTGCTGCTGAAACTCCTGGTGTTTTCAAAGTTCCATCTGATACTTTGAAGAGGGCATGCGAAGCTTCAACACCCGACAATGCCCTTGCTGCTGAGAAAACTGGTGTTGCAGGTTCAACATTTCATTCCTGTTCATTTGGTTCAAATTCTTCTCTGAAAGGAGATGGGCCAAGGAAAAAAATCCGCACAAGTGAATTCAAAGTAAACAGTGATAGGAAATATACACAAAATGGGGTAGCTTCTCGACACGAAGGAGTAAGCTTGGCAAATGAACTTGGGTCTGAAAAGGATAATTCTGAAACCGGAAGGATGAGTGCTGCTGGAAACTACAAACGTAATGTTTTTTGGGAAATACCACAACAGAAAATGAAGAAGATTCTAATGGAGAAGGCGAGAAAGGAAATTCAGAAAAAGCTTGAAGAATGGAATGTTGCTTCTGAAGCAAGGAATTTGGAAAAGTCAAAGTATGCTGCTACAGAGATCATAGAGAAGGACAAGAAAAAGGCGAAAGATGTCATAGAGAAGGAGAACAAAAAGATTACATATGCTGTAAAACCTGACACGAAAAATGCTATTCGTGGTGCAAAACCTGGTGCACAAGGAATTGTTGCTTCTGATAAAATTGGCAAAAAACATATCCCTCCTGCTGATCCAGTTGTGGCTGATTATACAGTCTTGATGAGTGTTCCAGACCCGGACTTCCATGATTTCGATGGGGACCGTATTGAAAATGCTTTTGGCGCAAACCAGGTGTGGGCTGTTTATGATGAGGACGATGGCATGCCACGCTACTATGCTTTGATTCACGATGTGATCTCAAAGAAACCGTTCAACATGAGAATTAGCTGGCTTAACTCGAAGACAAACGATGAATTGGCTCCAATAGAGTGGGTTAGTTCTGGCTTTCCCAAGACCTCTGGGGATTTCAGAATAAGCAAGCATGTTGTCTATAACAGTCTTAACTCCTTTTCGCACAAGGTTCAATGGACAAAAGGTGCAAGAGGGATTGTGCATATATATCCCAAGAAGGGGGATGTTTGGGCCTTGTATCGGAACTGGTCTGCTGACTGGAACCAATTTACCAAAGACGAAGTCATTCATAAGTATGACATGGTGGAAGTGCTGGAAGACTACAATGAGAAGCAAGGTGTGAATGTTGCTCCACTTGGTAAAGTTCAGGGTTTCAAGACAGTGTTTTGCCGGAACAGGGATCCAAGGAGAATAAAAAACATTCCAAAGGCAGAGATGTTTCGCCTCTCGCACCAAGTACCTGCGTACTTGCTCACTGGTCAAGAAGGCCATAATGCTCCTAGAGGCTGCTTGGAGCTTGATCCAGCCGCCACACCTATGGAACTTCTTCAAGTAGTCACAGAAATACCCGAGCAAGAATCGGTAGATGAATTTCAGAGCAAAGAGAATCCCGGGCGTGATGAGAAGAGTCGAAAAATTAAGCAAGATTCTGCTCAGGAAATTCCAAGAAAGGAAGGGGCTGAAGCAATTGGAAAGAAAGATGGTAAGCCTGATATTTTGTATGTATATAGGAGAAGACATCTAAGGGAAAAGAGAGCAATGTAG 2472 0.4082 MECNKDDAIKAKELAEKTLLERDLSSAKIFAKKAQDMYPNLDGLRQLLATIEVYASAEKKVNGEVDWYRVLGVEPMADDQTIRRHYRKLALILHPDKNKSVGADEAFNLITQAWTCLSDNAKRVEYDQKRNFSGIYCGKPSAPARPSGFFGNLNAANWKNRDQGSATHQTQTTRPPTSMNPTFWTMCLSCRTKFEYNAHFVNCKLTCFNCNKTFVASEASPPRVYRNASSTSSISQMNQNNLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGISRMPSFSTAAETPGVFKVPSDTLKRACEASTPDNALAAEKTGVAGSTFHSCSFGSNSSLKGDGPRKKIRTSEFKVNSDRKYTQNGVASRHEGVSLANELGSEKDNSETGRMSAAGNYKRNVFWEIPQQKMKKILMEKARKEIQKKLEEWNVASEARNLEKSKYAATEIIEKDKKKAKDVIEKENKKITYAVKPDTKNAIRGAKPGAQGIVASDKIGKKHIPPADPVVADYTVLMSVPDPDFHDFDGDRIENAFGANQVWAVYDEDDGMPRYYALIHDVISKKPFNMRISWLNSKTNDELAPIEWVSSGFPKTSGDFRISKHVVYNSLNSFSHKVQWTKGARGIVHIYPKKGDVWALYRNWSADWNQFTKDEVIHKYDMVEVLEDYNEKQGVNVAPLGKVQGFKTVFCRNRDPRRIKNIPKAEMFRLSHQVPAYLLTGQEGHNAPRGCLELDPAATPMELLQVVTEIPEQESVDEFQSKENPGRDEKSRKIKQDSAQEIPRKEGAEAIGKKDGKPDILYVYRRRHLREKRAM 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03349 823 MobiDBLite consensus disorder prediction 153 177 - -
Aip08g03349 823 SUPERFAMILY Chaperone J-domain 41 126 IPR036869 -
Aip08g03349 823 Pfam DnaJ domain 66 127 IPR001623 -
Aip08g03349 823 Pfam Domain of unknown function (DUF3444) 526 731 IPR024593 -
Aip08g03349 823 MobiDBLite consensus disorder prediction 225 245 - -
Aip08g03349 823 Gene3D DnaJ domain 52 136 IPR036869 -
Aip08g03349 823 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Aip08g03349 823 PANTHER BNAC03G44070D PROTEIN 1 764 - -
Aip08g03349 823 PRINTS DnaJ domain signature 102 122 IPR001623 -
Aip08g03349 823 PRINTS DnaJ domain signature 68 86 IPR001623 -
Aip08g03349 823 PRINTS DnaJ domain signature 86 101 IPR001623 -
Aip08g03349 823 MobiDBLite consensus disorder prediction 764 801 - -
Aip08g03349 823 CDD DnaJ 66 119 IPR001623 -
Aip08g03349 823 Coils Coil 239 243 - -
Aip08g03349 823 SMART dnaj_3 65 122 IPR001623 -
Aip08g03349 823 PANTHER HEAT SHOCK PROTEIN-LIKE 1 764 - -
Aip08g03349 823 MobiDBLite consensus disorder prediction 225 249 - -
Aip08g03349 823 MobiDBLite consensus disorder prediction 375 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03349 Aip-Chr8 124765846 124768317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03349 4 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.131 1.58e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03349 - - ahf:112772645 1545.02