Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03346 ATGGTTGTTTCAATGCAGAGGAAGAACAAGTTGAAGGAGTTCATAGGACACAAATGGGTAGTGTTTGTGTGTGCAATATGGGACATGTCATTTGCAGGAACATCATACATGTTTGGGAGCATTTCTCCAGTGATCAAGAGCAGCATGGGATACAATCAGCAACAAGTGGCGTTCTTGAGTGTTGCAAAGGATCTTGGTGACAACGTTGGACTCCTTGCTGGTAAGATCAGTGAGGTTTCACCAACTTGGAGGCTCATTCTTGTTGGGATTATTCACAATGTTTTTGGTTATGGCCTTGTTTGGCTTGTTGTCACTCATAGGCTTCCTTCTTTGCCTTTGTGGATGCTATGCTTTTTCATCTTCTTGGGACAAAATGGATCTACATATTACAACACGGCCGCGCTAGTTTCTTGTGTGCAAAGTTTCCCGGAGAGTCGAGGACCGGTGGTGGGGATACTGAAGGGTTTTGTTGGCTTAAGCGGCGCAATATGGACTCAAATTGTTGCCATGATCAGCTTCCCTGATCAAGCATCTCTGATTTTTGTCATAGCAGTTGGGCCTGCTATGGTTTCTTGCGCTCTCATGTTCATCATAAGGCCTGTTGAAAGCTACAACAAGCAATCTTCTAGATCCTCTGAGGATGGTTCTGGCTTCATGTTCATCTATAGCGTTTGCCTTCTATTAGCAGCATACCTTATGGGGGTTTTAATGCTAGAAAACATGTTCAATTTGGACCACAACACCATTACATTAATCGCGATTGTTTTGATCATTCTCATTTTGCTTCCAATTATAGTTCCTATCTTTATGATTTTCTTTACTCAACCTCAAAATCTAGATCAAGAAAGCCTTCTTCAACCAGAAACAAGAACAAGTACATCAACGCGTGTGGTAGATGATGAGACTAGTGCAAGTTCTTGCCTTGTCAAAGAAGATAAAGCTCAAAAGCAAACAGGGCTGCCAGTAACGGAAAGGCCAGGGAAAATTGTTAAGTTTCAAGCTAAGCTTTCGCGAGTAATCTCTGAAGCTGTGAAGAAATTGAAGCAGAAGAATGGGCCGCATCGAGGAGATGATTTCACCCTATCACAAGCATTGATGAAGGCTGATTTCTTGATCATGTTCTTCTCTATTGTCTTGGGGTGTGGATCAGGTTTGACAATGATCAACAACATGGGTCAGATTTGCCAGTCCTTGGGAGACAACAATGTCAATATGTATATATCAGTTATCAGCATATCAAACTTCCTCGGCCGAGTCGGCGGCGGCTTTTTCTCAGAGGTTATAGTAAGAAATTTTGCGTACTCGAGACTTCTAGCATTGGCAGTGGTTCAAGGAATGATGGCAGTGGGACTCTCCTACTATGCCATGGGTTTGGTTGGTCAAGTTTATGTAGTGGCCATATCAATGGGTTTTGGCTATGGTGCACACTGGTCAATTGCAATTGCTGCAGCTTCGGAGATATTTGGCTTGAAGAACTTTGGAACTTTGTACAATTTTCTCACTGTGGCTAGCCCAACCGGATCTCTATTTTTGTCCGGATTCGTCGCGAGCAAAATATATGACTACTATGCAGAGCAGCAAGCAAAACAGAGAATGCAGAGTCTTAAGGCCTCGTTGAACTTTACATTGCCTTATGTTGCAAGAAACGAAGAATCGCTTGTTTGTGAAGGAAACATATGCTTTTCCCTGACATGTATAATCTTCGCAGTGGTTTGTCTGTTCGCTGCAGCTTTGAGCTTGATCTTAGTCTGCCGGACTAAGAGGTTCTATGCGCAACTTCATGTGAAGTCTCTATCTTGA 1800 0.4289 MVVSMQRKNKLKEFIGHKWVVFVCAIWDMSFAGTSYMFGSISPVIKSSMGYNQQQVAFLSVAKDLGDNVGLLAGKISEVSPTWRLILVGIIHNVFGYGLVWLVVTHRLPSLPLWMLCFFIFLGQNGSTYYNTAALVSCVQSFPESRGPVVGILKGFVGLSGAIWTQIVAMISFPDQASLIFVIAVGPAMVSCALMFIIRPVESYNKQSSRSSEDGSGFMFIYSVCLLLAAYLMGVLMLENMFNLDHNTITLIAIVLIILILLPIIVPIFMIFFTQPQNLDQESLLQPETRTSTSTRVVDDETSASSCLVKEDKAQKQTGLPVTERPGKIVKFQAKLSRVISEAVKKLKQKNGPHRGDDFTLSQALMKADFLIMFFSIVLGCGSGLTMINNMGQICQSLGDNNVNMYISVISISNFLGRVGGGFFSEVIVRNFAYSRLLALAVVQGMMAVGLSYYAMGLVGQVYVVAISMGFGYGAHWSIAIAAASEIFGLKNFGTLYNFLTVASPTGSLFLSGFVASKIYDYYAEQQAKQRMQSLKASLNFTLPYVARNEESLVCEGNICFSLTCIIFAVVCLFAAALSLILVCRTKRFYAQLHVKSLS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03346 599 Gene3D MFS general substrate transporter like domains 16 211 IPR036259 -
Aip08g03346 599 CDD MFS_Mch1p_like 17 576 - -
Aip08g03346 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 598 - -
Aip08g03346 599 Pfam Nodulin-like 18 268 IPR010658 -
Aip08g03346 599 SUPERFAMILY MFS general substrate transporter 18 589 IPR036259 -
Aip08g03346 599 PANTHER NODULIN-LIKE/MFS TRANSPORTER 8 598 - -
Aip08g03346 599 Gene3D MFS general substrate transporter like domains 365 589 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03346 Aip-Chr8 124708985 124712701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03346 8 597 Nodulin-like Gene Family AT5G14120 49.410 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03346 - - gmx:100784744 825.854