Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03332 ATGGAAAATGGGCATGGCTCAAAATTTGAACTTGTTGTAAGGCAAATAGGAGAACCAACAAAAGTGAAGCCTTCAGAAGAAACACAAAAGGGACTCTATTTCCTTTCAAACCTTGACCAGAACATTGCTGTTCCAGTTAAAACAGTTTATTGCTTCAAATCAAGTTCAAGGGGGAATGAAGAAGCTCCACAAGTAATCAAAGATTCACTCTCAAAGATTCTTGTCCCTTATTACCCCATGGCAGGTACCTTGATTCTAAGCAAAGAAGGGAAGCTTATAGTGGATTGCACTGAAGAGGGTGCAGTGTTTGTTGAGGCTGAAGCAGAGTGTAACATTGAAGACATTGGAGATTTAACAAAACCAGATCCTCATAATCTTGGCAAACTTGTTTATAGTGTTCCTGGTGCAACCAATATTCTTGAGATGCCTCTTATGACTGCTCAGGTGACAAAGTTCAAATGTGGAGGATTCAGTTTGGGACTAAACATGATCCATTGCATGAAAGATGGAATATGTGCCATGGAATTTGTGAATGCATGGAGCAATGTAGCCAGAGGCTTGAGCTTGAAGGTTCCTCCATATCTCGACCGATCGATGCTCAAAGCGCGCGACCCTCCCAAGATTGAATTCGAACACACAGAATTTGAGCAGATAGAAGATGTATCAAACACTAACAAGCTTTATGAAGAAGAGATGATCTACAAATCATTCACCTTTGACCCTCACAAGCTTGAACACCTCAAGAAAATGGCTACCCAAGATGGGGTTTTGAAGAAATGCACAAGTTTTGAAGCACTATCAGGATTTGTATGGAGGGCTAGATCTGAAGCCTTAAGAATGAAACCTGATCAAAAGACTAAACTACTCTTTGCAGTTGATGGAAGGTCCAAATTTGTGCCACCAATACCTGAGGGGTACTTTGGGAATGCTATTGTTCTAACAAACTCTCTTTGTAAGGCTGGTGAATTACTGAATAGCCCTTTGTCATATTCAGTGAGTTTGGTTCATGAAGCAATTGAAATGGTGAATGATAGTTACATGAGATCAGCCATTGATTATTTTGAAGTCACAAGAGCAAGGCCTTCTTTGGCAGCTACATTATTGATCACAACTTGGACAAAGTTGTCATTTCACACTACAAATTTTGGTTGGGGTGATCCTTTGTGTTCCGGTCCTGTTACTTTGCCTGAAAGAGAAGTTGTTTTGTTCTTGTCTCATGGCCATGGAAGGAGAAGTATTAATGTTCTTTTGGGTTTGCCTGCTTCTGCCATGAACACCTTTCAGGAATTGGTTAACCAAGTTTGA 1305 0.4046 MENGHGSKFELVVRQIGEPTKVKPSEETQKGLYFLSNLDQNIAVPVKTVYCFKSSSRGNEEAPQVIKDSLSKILVPYYPMAGTLILSKEGKLIVDCTEEGAVFVEAEAECNIEDIGDLTKPDPHNLGKLVYSVPGATNILEMPLMTAQVTKFKCGGFSLGLNMIHCMKDGICAMEFVNAWSNVARGLSLKVPPYLDRSMLKARDPPKIEFEHTEFEQIEDVSNTNKLYEEEMIYKSFTFDPHKLEHLKKMATQDGVLKKCTSFEALSGFVWRARSEALRMKPDQKTKLLFAVDGRSKFVPPIPEGYFGNAIVLTNSLCKAGELLNSPLSYSVSLVHEAIEMVNDSYMRSAIDYFEVTRARPSLAATLLITTWTKLSFHTTNFGWGDPLCSGPVTLPEREVVLFLSHGHGRRSINVLLGLPASAMNTFQELVNQV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03332 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 431 - -
Aip08g03332 434 Gene3D - 216 434 IPR023213 -
Aip08g03332 434 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 14 431 - -
Aip08g03332 434 Pfam Transferase family 20 429 - -
Aip08g03332 434 Gene3D - 15 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03332 Aip-Chr8 124581089 124587774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03332 15 434 Monolignol Biosynthesis Gene Families AT5G48930 35.698 1.50e-93 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03332 K15400 - gmx:100794490 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03332 08 124581089 124587774 Aip08g03332 08 124581089 124587774 ECH