Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03323 ATGCAACTATGTTGCAACTACGATCCATGGGATTTGCCAGGGAATAATAATAATTATGGGGAGCAAGAAGAGAGATACTTGTTCAGCTCAAAGGAAGTTAAGTATAGAAACGGTAACCGAATGAACAGAATAACGAAATCTGGATATTGGAAAGCAACTGGATCAGACAAAAGAATAATTTCAACATCATGTAATAATAATAATAATAGTAATATTGTTGGGATAAGAAAAACTCTTGTATTCTATCATGGAAAATCTCCAAATGGCTCTAGAACTCATTGGATCATGCGTGAGTATCGACTTGTCACTACTCCTTCTAATTCATCCCAGAAGTATGTAGAAGACTTAGGGAATTGGGTTCTTTGCCGCATATTCAAGAAGAAAAGAAGCATAGAAAGTCAACATCACATGGTCAACAACAAAATTAATAATGTTGTCGAGGTGGCTAATAATAATAATAAGCCAATATTCTTTGATTTTATGAGGCTATATGACTCGCCAATATCTTCTTCTTCATCCTCATCTTCTTCTTGTTTAAGTTCTGATTTCATAACTCAAGTGTAA 564 0.3422 MQLCCNYDPWDLPGNNNNYGEQEERYLFSSKEVKYRNGNRMNRITKSGYWKATGSDKRIISTSCNNNNNSNIVGIRKTLVFYHGKSPNGSRTHWIMREYRLVTTPSNSSQKYVEDLGNWVLCRIFKKKRSIESQHHMVNNKINNVVEVANNNNKPIFFDFMRLYDSPISSSSSSSSSCLSSDFITQV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03323 187 ProSiteProfiles NAC domain profile. 1 127 IPR003441 GO:0003677|GO:0006355
Aip08g03323 187 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 185 - -
Aip08g03323 187 SUPERFAMILY NAC domain 5 127 IPR036093 GO:0003677|GO:0006355
Aip08g03323 187 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 185 - -
Aip08g03323 187 Pfam No apical meristem (NAM) protein 4 101 IPR003441 GO:0003677|GO:0006355
Aip08g03323 187 Gene3D NAC domain 1 132 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03323 Aip-Chr8 124432903 124435294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03323 4 162 NAC Transcription Factor Family AT5G13180 48.851 1.34e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip08g03323 NAM 1.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03323 - - aprc:113868555 196.823