Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03319 ATGATGGATGATGGCCACAAACACGGAAACAGTAGGCATACAATAGACTACTACAGAGGAGCAAATTCCCCGTGGAGTATGGCTTCGCAGCATCAAGTAACGGAACCAAATGCACTAGTTATGAATAAGAAAATTAGGTCCATTATGGCCGAAAGGCGTGCAATTCTAGAATTGGAAGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTAGAGATGAGGCCCTGCGTCAGAGGGATGAAGCAATTGCTCAGAGGGATAATGCCATAAGGGAACGCGATAATGCCCTTGCTGCACTTCAAAATCGGGAAGATGCTATCAACTTCTCATTGGGCAATGGAGTTCAACGCGGTTCAAAACGAATGCACCATCCTGCTAACTATCTAGATAACATGACAGATGCCACATACAACACAAAGGATGTGCCGATCACTGATGCCTTCCCGGTGACAATCATACCTTCTGATGCTATCAAATCACATCAGGCTAAGAAAACTAAGGAGAACAAGACAATCTCTCCTAAGGCAGCAAAGACTCCTAGTAAAGGAAAGAAAATGGGTGAGGATTTAAATCAAAGGGCATCTTCTGAAGGGACGAAGTTCAAATCAGAATGGGATAGGCAAGATGTTGGCTTGAATTTGGTTACCTTCGATGAAACTTACATGCCCGTCCCGGTTTGCACATGCACGGGAGTACCACGGCAGTGCTACAAATGGGGTAATGGTGGGTGGCAGTCATCTTGTTGTACCACCACTTTGTCAGTATATCCGCTACCGCAGCTTCCTAACAAGCGCCATGCACGTATCGGAGGGAGAAAGATGAGCGGCAGTGTCTTCACACGATTACTAAGTAGGTTTGCAGCACAAGGACATGATTTATCTGTACCATTGGATCTTAAGGACTACTGGGCCAGACATGGAACAAATCGCTACATTACTATCAAGTAG 948 0.4536 MMDDGHKHGNSRHTIDYYRGANSPWSMASQHQVTEPNALVMNKKIRSIMAERRAILELEAAISEKNEALAARDEALRQRDEAIAQRDNAIRERDNALAALQNREDAINFSLGNGVQRGSKRMHHPANYLDNMTDATYNTKDVPITDAFPVTIIPSDAIKSHQAKKTKENKTISPKAAKTPSKGKKMGEDLNQRASSEGTKFKSEWDRQDVGLNLVTFDETYMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFAAQGHDLSVPLDLKDYWARHGTNRYITIK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03319 315 Pfam GAGA binding protein-like family 2 315 IPR010409 -
Aip08g03319 315 PANTHER - 2 315 IPR010409 -
Aip08g03319 315 PANTHER PROTEIN BASIC PENTACYSTEINE4 2 315 - -
Aip08g03319 315 SMART GAGA_bind_2 2 315 IPR010409 -
Aip08g03319 315 Coils Coil 58 99 - -
Aip08g03319 315 MobiDBLite consensus disorder prediction 160 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03319 Aip-Chr8 124393938 124397397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03319 2 315 BBR or BPC Transcription factor family AT2G21240 56.782 6.25e-125 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aip08g03319 GAGA_bind 3.2e-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03319 - - gmx:100785547 508.064