Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03312 ATGGAGGTGTTGAGTTTTCCATCCTCCTCCTCTTCTTCTTCTTCTTTTGATGGAAATGAAGATAGAATTGGAATGCTTCCAGGACAACCAGAAAACATAGAATTTGAACAGTTCTCAGGATATGTAACTGTTGATCAAAAGAAGCACAAGAATCTCTTCTATTATTTTGTTGAATCACAAACTCATCCTTCTTCAAAACCTCTTGTTCTCTGGCTCAATGGAGGACCTGGTTGTTCATCACTTGGAGTTGGTGCATTCTCTGAAAATGGACCGTTTAGGCCAAATGGAGAGTTTCTTATTAAGAATGAATATAGTTGGAATAAAGAAGCaaatatgttgtatttggagacaccgaaggtttatttaagatttaattattttgttggtctttatagttttatcaaatttgtaattaaatCTAGGGACAATGTTGTATTTCTTCAACGCTGGTTCAACAAGTTCCCTCAATACAAGAACCGAGATCTGTTTCTAACTGGCGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAAATGAATTCAAAGAAAAGGATATTCAATCTCAAAGGAATAGCCTTGGGTAATCCAGTTCTAGAATACGCCACAGACTTCAATTCAAGGGCAGAGTTCTTTTGGTCTCATGGGCTAATATCAGATTCAACGTACAAGATGTTCAGCAATGTGTGTAACTATTCAAGATATGTGAGTGAGTACTATAGAGATTCACTTTCCATGGTTTGTTCAGAGGTAATGGGACAAGTTAGCAAAGAAACAAGCAAATTTGTTGACAAATATGATGTCACTCTTGATGTTTGCATTTCCTCTGTGCTTTCACAATCAAAGGTTATTTGTCCTCAATCCCAAGAAAAGAATGAGAGGGTAGATGTGTGTGTAGATGACAAGGTTACAAACTACTTGAATAGAAGAGATGTACAACAAGCACTTCATGCTAAGCTTGTTGGTGTAAGAAAATGGGATGTTTGCAGCAACATATTGGACTATGATATGCTTAATGTGGAAATACCTACACTTCCTCTTGTTGGATCACTAGTAAAAGCTGGAGTTAGGGTCCTAATTTATAGTGGAGATCAAGATTCAGTGATTCCACTGACTGGAAGCCGCACTTTGGTTGGTGGATGGACTCAAGTTTATGGGAACAATATGCTTTCATTTGCCACAGTAAGAGGGGCAGCACATGAAGCACCTTTCTCACAGCCTGAAAGATCATTTGTGCTTTTCAACTCATTCCTACAAGGCAGGCCTTTACCACAAATTTTCTGA 1296 0.3627 MEVLSFPSSSSSSSSFDGNEDRIGMLPGQPENIEFEQFSGYVTVDQKKHKNLFYYFVESQTHPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNEYSWNKEANMLYLETPKVYLRFNYFVGLYSFIKFVIKSRDNVVFLQRWFNKFPQYKNRDLFLTGESYAGHYVPQLAKLMIEMNSKKRIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFSNVCNYSRYVSEYYRDSLSMVCSEVMGQVSKETSKFVDKYDVTLDVCISSVLSQSKVICPQSQEKNERVDVCVDDKVTNYLNRRDVQQALHAKLVGVRKWDVCSNILDYDMLNVEIPTLPLVGSLVKAGVRVLIYSGDQDSVIPLTGSRTLVGGWTQVYGNNMLSFATVRGAAHEAPFSQPERSFVLFNSFLQGRPLPQIF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03312 431 MobiDBLite consensus disorder prediction 1 19 - -
Aip08g03312 431 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 382 IPR001563 GO:0004185|GO:0006508
Aip08g03312 431 Pfam Serine carboxypeptidase 27 381 IPR001563 GO:0004185|GO:0006508
Aip08g03312 431 Pfam Serine carboxypeptidase 382 424 IPR001563 GO:0004185|GO:0006508
Aip08g03312 431 PANTHER CARBOXYPEPTIDASE 382 429 - -
Aip08g03312 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 394 407 IPR001563 GO:0004185|GO:0006508
Aip08g03312 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 102 114 IPR001563 GO:0004185|GO:0006508
Aip08g03312 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 175 IPR001563 GO:0004185|GO:0006508
Aip08g03312 431 ProSitePatterns Serine carboxypeptidases, serine active site. 164 171 IPR018202 GO:0004185
Aip08g03312 431 PANTHER CARBOXYPEPTIDASE 18 382 - -
Aip08g03312 431 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 382 429 IPR001563 GO:0004185|GO:0006508
Aip08g03312 431 Coils Coil 431 431 - -
Aip08g03312 431 MobiDBLite consensus disorder prediction 1 23 - -
Aip08g03312 431 Gene3D alpha/beta hydrolase 17 428 IPR029058 -
Aip08g03312 431 SUPERFAMILY alpha/beta-Hydrolases 26 428 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03312 Aip-Chr8 124258656 124263282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03312 310 427 Calmodulin-binding Proteins AT2G22960 28.986 7.27e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03312 K16297 - gmx:100795668 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03312 08 124258656 124263282 Aip08g03312 08 124258656 124263282 ECH