Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03311 ATGAGAAAAGACCAACAAAACCAGCATCCTCTACTCATTACTAATCCTTCTCAACAAAATCAGGGAAAAGAAGAAGAGAATCATCATCATCATCATCAATTGGAAGTTGAAGCAGAGGATTCTCAACTTCCAGAGTCACCATTGCCTCTCACTGTTACTTCCAGGGTATTGTATATGTTGGGAGATATAGCAGCAGGGCCTGCGTACAAGTTCACGCAATGGCTTCAATTGGTTCGTAAACGCACTTCCAAGTTTGGACCTTCTGGCTTCCCTAACCGCCTTTCTACCATGCCTTCTTCTAGCCCTGGTGAGGCTATTGAGGATGCAACGAGCGATCAGCCTCCAAAACAAACTGAGGTTAACTTGTGGGAGAGGCTCGGTAAAGCCGAAATGTTGGACATTGAATCAAGCATGTTTTCTTGGGACAGGCTCACTTCGCTTCACCACACTGAACACAGCAGCATCAATGAGAATTCCGAGGATGAAATGAACAAAGCTCTTGAGGTAACTGTAAATTCTGGAGGGGTTGTCTTCTTTGCTTTTTTCAATGGCCTTGGGGACGATGGTGCTTTTCCGAAAGAAGCAGCAGCCGTTATAAAAATATCATCATCAAGATTGGCAACACAATCAGAACGCCTTGGTTATGAATTCGCTAGGTGGTTGGGAGTTCGAACTCCACAGGCTAGAGTGATTCACAATACTAGTTCTGAGTGGCTCCAAATAAAGGAAGCTACAGAAAAAGCTAGAGATGCAGCAAGTTCTAAGGGTGATGAAAGTGGCGAAATGACTTGCTCAGAACTTTTGGAAGCACTTGAACTCGGCCGATGTCTCTATTTTATGAGTTATGTACATGGTTCACCTTTGCTTGAAAGTCCCTATGCATTCGAATCTCGGGAAACTGCAGAAAGAACATCAGCAGCCCTTGGCAGGGTACTGATGTTGGACCTTGTCATTAGAAATGAAGATAGGCTCCCTTGCCGGCAACTTAGGTGGCGAGGGAACTCCGCAAATTTGTTGTTTGCTGAAAAGTTAATCTCAGCAAATACAGACACACTAGGAGAAGCTTTAGATTCTGCAATGAACCATTACAGACCAAGGGTGGTTCGAGCACTTCAAAGTGAAAGGAGGTCAGTTTCAATGGATTCCAAATCAAGTTCTCGTAATCCTACATTGTTATCACAACGCTCAGATGTTTCGGATATAGTGGAATCAGCAATATCTACTAGGATGAGTCTTAATGGTCAAACATCAGGAGAATCACCTTGTACTAACTTTAATGTTGTGGCTATTGATTCTGGTGTTCCTCGCCGGCCTCCTACTGGAAAACGTGCAGATGATCAGACTAATTATCCCAAGTTGGTTGAGTTGCTACTTAACAGTTCCGAGTTTTCCTCGAACCTGCTATATGATATAACCGGAGGCAAATTAGGATGTCCTGCACCTGAAGACATAAATCCGGCAACTGATGTACCTGCAACTGCTAGTGACATAACAGTAGTTCATGAGTTTCGTTGTAGTTTTCGCGCTGCTCTTAGGGATCTGCAGGGGTTCTATATATTCCTACTGACACTTCACCAGAAACTTGATAACATGTTACGATCCCTTATGAATATTAGAAGCAAAATTTCGTCTTTGGAATCTGAAAAAGATGAATTTTCTTCACCCATTGCTGCTGCTAGCAGTCCCTCTCCAACAGGTAGAGAGAGGTCTCCTCATGATAACCATCATGATTGTTGTGACTCCGGGTCTGCATCAAGAGAAGGTTGTCATGGAAAGCACTCGAAAGGAAGCGCAGAATCACATAGTGGTCTTCGCTTAACAGCTAAGCTTCGAGACTTCAATAAATTTGCAAAGGTTGATGCCGAATCTAGTAAAGAACTGGAACAGTGGAATGAAATGCTTAAAAATGATGTCATCAAGTTATGCCAAGACAACAATTTCAATACAGGTTTTTTCGAAGGTAGTGACGACAACTTTGTCATTGATGCATATGAACTGAAGATAAGACTTGAGCATATACTTGAGAGGATTGTGTTGATATCTGAGGCTGCGAATACAGAGAAACCTTCCGCCGTTACAAACACTCTCTATGTTGGTGGAGCACTGGCTGCAAGATCTATATACACGTTGCAACGCTTGGGAATCACACATATATTGTGTTTGTGTACTAACGAAATTGGACAGGCCGATTCTCAGTTTCCTGATCTATTTACGTATAAAAATTTCTCTGTGAGTGACAATGAAGATTGTAACATCAGCAGCATATTTGAAGAAGCTTGTGATTTTATAGATTATGTTGAGCAGATTGGTCAAAGAGTTTTAGTTCATTGTTTTGAGGGGAGAAGCAGAAGTGTTACTCTGGTTCTTGCTTACTTAATGCTCAGAAAGAAGTTCACTCTACTAGAAGCATGGAACACACTGAAACGAGTACACCGCCGAGCACAGCCGAACGATGGTTTTGCGAAGATCTTACAGGAACTGGATAAAAAACTGCATGGAAAGGTATCTATGGAGTGGCAGCAACGAAAACCAACGATGAAAGTTTGCCCCATCTGCGGCAAGAATGCCGGATTAAGCAGCAGCTCACTTAAGCTCCATCTCCAGAAGTTGCATAAAAAGCTGTCGTCCGGGAGTGTAGACAGTGCCATGACAATGGAAATACAGAAGGCACTGACGGCTTTGAAGGTTAGCCGCGGCGGCAGTGTTAGCCCAACACAGAGGCAGTCTCAGTCAATGATAGATGAATAG 2748 0.4305 MRKDQQNQHPLLITNPSQQNQGKEEENHHHHHQLEVEAEDSQLPESPLPLTVTSRVLYMLGDIAAGPAYKFTQWLQLVRKRTSKFGPSGFPNRLSTMPSSSPGEAIEDATSDQPPKQTEVNLWERLGKAEMLDIESSMFSWDRLTSLHHTEHSSINENSEDEMNKALEVTVNSGGVVFFAFFNGLGDDGAFPKEAAAVIKISSSRLATQSERLGYEFARWLGVRTPQARVIHNTSSEWLQIKEATEKARDAASSKGDESGEMTCSELLEALELGRCLYFMSYVHGSPLLESPYAFESRETAERTSAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLFAEKLISANTDTLGEALDSAMNHYRPRVVRALQSERRSVSMDSKSSSRNPTLLSQRSDVSDIVESAISTRMSLNGQTSGESPCTNFNVVAIDSGVPRRPPTGKRADDQTNYPKLVELLLNSSEFSSNLLYDITGGKLGCPAPEDINPATDVPATASDITVVHEFRCSFRAALRDLQGFYIFLLTLHQKLDNMLRSLMNIRSKISSLESEKDEFSSPIAAASSPSPTGRERSPHDNHHDCCDSGSASREGCHGKHSKGSAESHSGLRLTAKLRDFNKFAKVDAESSKELEQWNEMLKNDVIKLCQDNNFNTGFFEGSDDNFVIDAYELKIRLEHILERIVLISEAANTEKPSAVTNTLYVGGALAARSIYTLQRLGITHILCLCTNEIGQADSQFPDLFTYKNFSVSDNEDCNISSIFEEACDFIDYVEQIGQRVLVHCFEGRSRSVTLVLAYLMLRKKFTLLEAWNTLKRVHRRAQPNDGFAKILQELDKKLHGKVSMEWQQRKPTMKVCPICGKNAGLSSSSLKLHLQKLHKKLSSGSVDSAMTMEIQKALTALKVSRGGSVSPTQRQSQSMIDE 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03311 915 MobiDBLite consensus disorder prediction 374 395 - -
Aip08g03311 915 MobiDBLite consensus disorder prediction 1 47 - -
Aip08g03311 915 MobiDBLite consensus disorder prediction 553 602 - -
Aip08g03311 915 MobiDBLite consensus disorder prediction 22 39 - -
Aip08g03311 915 MobiDBLite consensus disorder prediction 88 117 - -
Aip08g03311 915 Gene3D - 292 418 IPR036940 GO:0016301
Aip08g03311 915 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 25 915 IPR035010 GO:0004721|GO:0009737|GO:0043622
Aip08g03311 915 MobiDBLite consensus disorder prediction 86 117 - -
Aip08g03311 915 ProSiteProfiles Dual specificity protein phosphatase domain profile. 688 833 IPR020422 GO:0006470|GO:0008138
Aip08g03311 915 MobiDBLite consensus disorder prediction 7 21 - -
Aip08g03311 915 MobiDBLite consensus disorder prediction 375 395 - -
Aip08g03311 915 Gene3D Protein tyrosine phosphatase superfamily 671 843 IPR029021 -
Aip08g03311 915 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 687 833 IPR029021 -
Aip08g03311 915 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 25 915 - -
Aip08g03311 915 MobiDBLite consensus disorder prediction 568 602 - -
Aip08g03311 915 CDD DSP 689 826 - -
Aip08g03311 915 Coils Coil 528 548 - -
Aip08g03311 915 SUPERFAMILY Protein kinase-like (PK-like) 73 447 IPR011009 -
Aip08g03311 915 Pfam Dual specificity phosphatase, catalytic domain 696 828 IPR000340 GO:0008138|GO:0016311
Aip08g03311 915 Pfam Actin-fragmin kinase, catalytic 119 375 IPR015275 -
Aip08g03311 915 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 757 809 IPR000387 GO:0016311|GO:0016791
Aip08g03311 915 SMART dsp_5 688 830 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03311 Aip-Chr8 124251543 124256393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03311 45 899 Protein tyrosine phosphatase (PTP) family AT5G23720 62.542 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03311 K14165 - gmx:102661225 1242.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03311 08 124251543 124256393 Aip08g03311 08 124251543 124256393 ECH