Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03290 ATGTCCTCTTCCACCGTTGGCAATGAGGAGGAGAAGCTTTACCCTTCCCCACTAGCCTCTCACGACGACATCGTCAAGGACCCTTCTGTCTTTTGGGACACTCTCAGACGCTTTCACCTCCTTCTCAGTACCAAATTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGATTTGCACGTCCTGTACGTGGAGGTTACGAGGAGAAGTGGCTATGAGAAGGTGGGGTCCTTCCTTCCGATTCATGAGAATACTTAG 255 0.502 MSSSTVGNEEEKLYPSPLASHDDIVKDPSVFWDTLRRFHLLLSTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVGSFLPIHENT 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03290 84 Gene3D - 18 77 IPR036431 GO:0003677
Aip08g03290 84 ProSiteProfiles ARID domain profile. 25 84 IPR001606 GO:0003677
Aip08g03290 84 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 4 74 - -
Aip08g03290 84 Pfam ARID/BRIGHT DNA binding domain 31 74 IPR001606 GO:0003677
Aip08g03290 84 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 4 74 - -
Aip08g03290 84 SUPERFAMILY ARID-like 21 74 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03290 Aip-Chr8 123915942 123917090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03290 12 74 ARID Transcription Factor Family AT1G76110 82.540 5.51e-32 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Aip08g03290 ARID 4.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03290 - - aip:107611772 151.369