Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03256 ATGTCGAGCTTCCACGTCGGCGGCAAGGTGGTTGACCGCGTCGATTTGATGCGGAAGAAACAACTGCCGTGGCGAATCGACGTTTGGCCCTTCGCCGTTCTCTACGGCGTATGGCTCGCCTCGATCCTCCCGAGCCTGGACTTCGTCGACGCCGCCATCGTTTTCGGCGGCCTCGTTGCTCTCCATATCCTCGTTTGGCTTTTCACCGGTTGGTCCGTTGATTTCAAGTGTTTTGCACATTACAGCAAGGTCAGAGATATTCACCAAGCTGATTCTTGCAAGATAACGCCGGCGAAGTTTTCTGGTTCCAAAGAGGTCGTGCCGCTCAGGTTTCGGAAAATTCCTGCAGGTTCTTCATCGGCGACGGATCTGGAGGAGATTTACTTTGAGTTTAGAAAACAGTGTTTTGTATTTTCAAATGAGAAGGGAACATTTTGCAAACTTTCTTATCCTACAAAGGAAACATTTGGACATTATCTCAAGTGTAGTGGGCATGGCTCTGAAGCTAAAATCCTTGCTGCTACAGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAGCCAACCTTTCAGAAATTGATGAAAGAGCATTGCATGGAGCCTTTTTTTGTTTTTCAGGTTTTCTGTGTGGGTCTCTGGTGTTTGGATGAATATTGGTATTACAGTTTGTTCACTCTATTTATGCTGTTCATGTTTGAATCAACCATGGCAAAGAGTCGGTTGAAGACTCTTACTGAGTTAAGGCGTGTTAGAGTGGATAGTCAGATCCTTATGGTCCATCGTGGCGAGTCTACTCCTCAATGGAAGGTTTCAATCATGGGAAGGGGAAATGAGGAGAAGTTGTCAATAAGGCGAGATAAAAGTCATGTCTTATTTGGTGGAACCAAAATACTGCAGCACACTCCAGATAAGACTTTCCCTCTGAAAACGCCTGATGGTGGCTGCCTGGCTGTTGTGCTTAGAACAGGGTTTGAAACTAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCCACAGAAAGGGTTACTGCCAATAGCTGGGAAAGTGGACTGTTCATCTTATTCTTGGTTGTATTTGCTCTGATTGCTGCTGGTTATGTGCTTATCAAGGGATTAGAAGATCCCACAAGAAGCAAGTACAAACTTATACTAAGTTGTTCACTTATTGTTACTTCTGTGATTCCGCCCGAGTTACCGATGGAGTTATCAATTGCTGTGAATACTTCCCTGATTGCATTGGCGCGACGTGGGATATTTTGCACAGAGCCTTTCCGAATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGGACACTGACATCTGATGACATGGAATTTTCTGGAGTTGTTGGTTTGAATGGAACCACTGATTTGGAATCTGACATGAGTAGAGTGCCAGTGCGAACTGTAGAAATCCTGGCTTCTTGCCATGCTTTGGTATTTGTTGATAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCACTTAAGGGAATTGATTGGAGTTATAAATCTGATGAGAAGGCTGTTCCAAAAAAGGGTAGTGGCCAACCTGTCCAAATTGTTCAGCGGTACCATTTTGCATCTCACTTAAAACGAATGGCTGTTATTGTTCGCATTCAGGAGGAGTTTTTTGCCTTTGTGAAGGGTGCCCCAGAAATTATTCAAGATAGGCTCATTGACGTACCACCATCATATGTTGAAACCTACAAGAAATATACGCGTCAGGGGTCTCGTGTTCTTGCTTTGGCCTACAAGTCTCTTCCTGACATGACAGTCAGTGAAGCTAGAGGCTTGGATAGGGATGGAGTAGAGAGTGGACTTACTTTTGCTGGTTTTGTGGTATTTAATTGTCCTATAAGGTCAGATTCGGCTATTGTTTTATCCGAACTGAAAGGGTCTTCACATGACTTGGTGATGATTACTGGTGACCAAGCTCTGACAGCTTGCCATGTTGCCAGCCAAGTTCATATTATATCAAAACCTACATTAATCCTTGGCCCAGCAAGTGATGGTGTGGGATATAAATGGATGTCCCCTGATGAGACTGCAAATATTCCCTACAGCGAGAAAGAGGTTGAGTCTTTATCGGAAACTCATGATCTGTGTGTTGGAGGTGATTGCTTTGAAATGTTGCAACAGTCATCAGCTCATCTTCGAGTTATTCCTTATGTGAAGGTGTTTGCTAGAGTTGCACCTGAACAGAAAGAACTTATCCTGACCACTTACAAGACAGTGGGACGGATAACTTTGATGTGTGGGGATGGAACCAATGATGTTGGGGCATTGAAACAGGCCCATGTAGGAGTTGCTCTTCTAAATGCGATACCTCCAACTCAAAGTGGAAACTCCTCTAAAGAGTCAGCTGGGGAAGAAGATCCTATCAACCGTCATCAGGCAGCTGTTGATATGCAACGACAGAAGCTCAAGAAGATGTTTGAAGAGCTTAACGAGGAAGATGGCCGTGCCCCCGTTGTCAAGCTTGGTGATGCGTCAATGGCATCCCCTTTCACTGCAAAGCATGCATCTGTTGCTCCCACCACTGACATAATTCGTCAAGGTCGGAGTACCCTGGTGACAACCCTCCAGATGTTTAAAATTTTGGGCCTCAACTGCCTTGCTACTGCATACGTGTTGAGTGTCATGTATCTGGATGGTGTCAAGCTAGGTGATGTGCAGGCCACAATAAGTGGTGTCTTCACTGCTGCGTTTTTCCTCTTTATCTCCCATGCTCGCCCTCTTCCCACCCTCTCAGCTGAACGTCCCCACCCCAATATCTTCTGTGCTTATGTTTTCCTTTCCCTTATGGGGCAATTTGCCATTCACTTATTATTCTTGATCTCATCTGTGAAAGAGGCTGAAAAATACATGCCAGATGAATGCATCGAACCAGATGCAGATTTTCATCCCAACTTGGTCAACACTGTTTCATACATGGTCAGCATGATGCTTCAGGTTGCTACTTTTGCCGTGAACTACATGGGCCATCCCTTCAACCAGAGTATCTCAGAAAACAAGCCGTTCCGGTATGCTCTTATAGCAGCCGTAGGTTTCTTTACAGCGATTACATCTGATCTCTTCAGGGACTTAAATGACTGGCTGAAGTTGGTGCCACTCCCAGTGGGATTGAGGGACAAACTATTAATATGGGCACTTCTAATGTTTTTGATATGCTACTCATGGGAGAGACTATTGAGATGGGCCTTCCCTGGCAAGATCCCTGCATGGAAGAAGCGCCAAAGGCACGCGGTATCTAACTTTGAAAAGAAAAAAGAGGTCTAG 3294 0.4493 MSSFHVGGKVVDRVDLMRKKQLPWRIDVWPFAVLYGVWLASILPSLDFVDAAIVFGGLVALHILVWLFTGWSVDFKCFAHYSKVRDIHQADSCKITPAKFSGSKEVVPLRFRKIPAGSSSATDLEEIYFEFRKQCFVFSNEKGTFCKLSYPTKETFGHYLKCSGHGSEAKILAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQILMVHRGESTPQWKVSIMGRGNEEKLSIRRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLIKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLNGTTDLESDMSRVPVRTVEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAVPKKGSGQPVQIVQRYHFASHLKRMAVIVRIQEEFFAFVKGAPEIIQDRLIDVPPSYVETYKKYTRQGSRVLALAYKSLPDMTVSEARGLDRDGVESGLTFAGFVVFNCPIRSDSAIVLSELKGSSHDLVMITGDQALTACHVASQVHIISKPTLILGPASDGVGYKWMSPDETANIPYSEKEVESLSETHDLCVGGDCFEMLQQSSAHLRVIPYVKVFARVAPEQKELILTTYKTVGRITLMCGDGTNDVGALKQAHVGVALLNAIPPTQSGNSSKESAGEEDPINRHQAAVDMQRQKLKKMFEELNEEDGRAPVVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVFLSLMGQFAIHLLFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENKPFRYALIAAVGFFTAITSDLFRDLNDWLKLVPLPVGLRDKLLIWALLMFLICYSWERLLRWAFPGKIPAWKKRQRHAVSNFEKKKEV 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03256 1097 SUPERFAMILY HAD-like 431 783 IPR036412 -
Aip08g03256 1097 CDD P-type_ATPase_cation 170 1012 - -
Aip08g03256 1097 SFLD Haloacid Dehalogenase 417 860 - -
Aip08g03256 1097 Coils Coil 799 823 - -
Aip08g03256 1097 PANTHER CATION-TRANSPORTING ATPASE 261 1089 - -
Aip08g03256 1097 PANTHER CATION-TRANSPORTING ATPASE-RELATED 261 1089 - -
Aip08g03256 1097 ProSitePatterns Hypothetical cof family signature 2. 757 779 - -
Aip08g03256 1097 PRINTS P-type cation-transporting ATPase superfamily signature 638 648 - -
Aip08g03256 1097 PRINTS P-type cation-transporting ATPase superfamily signature 436 450 - -
Aip08g03256 1097 PRINTS P-type cation-transporting ATPase superfamily signature 757 776 - -
Aip08g03256 1097 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 262 1054 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Aip08g03256 1097 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 351 457 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g03256 1097 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 729 776 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g03256 1097 Gene3D - 432 616 IPR023299 GO:0000166
Aip08g03256 1097 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1074 IPR023298 -
Aip08g03256 1097 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 260 - -
Aip08g03256 1097 MobiDBLite consensus disorder prediction 781 801 - -
Aip08g03256 1097 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 442 626 IPR023299 GO:0000166
Aip08g03256 1097 Gene3D - 617 790 IPR023214 -
Aip08g03256 1097 PANTHER CATION-TRANSPORTING ATPASE 1 260 - -
Aip08g03256 1097 Gene3D - 245 336 - -
Aip08g03256 1097 Pfam E1-E2 ATPase 262 416 - -
Aip08g03256 1097 SFLD p-type atpase 417 860 IPR044492 -
Aip08g03256 1097 Pfam haloacid dehalogenase-like hydrolase 433 661 - -
Aip08g03256 1097 ProSitePatterns E1-E2 ATPases phosphorylation site. 438 444 IPR018303 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03256 1 1097 Primary Pumps ATPases AT5G23630 75.191 0.0 1817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03256 K14950 - gmx:100789385 1984.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03256 08 123605181 123616444 Aip08g03256 08 123605181 123616444 ECH