Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03255 ATGGCTTCCTCTTCTCACTTCCACCACCATAACCACTTCGAAAATACCAACAATTTTGCGGAGCAAGAAAAGGAACATAACTCTCAAAGACATGTACAACAAGAAGAAGAAGAAAATTGGCTCACGTTAGGGTTGGGGCTAGGAAGAAACGATGACGTCATCAACACATCATCATTCAATAATCAAGTAGTTCATCATCATCATGGATCAAACAATAATCCACAAGTTTTATTATGTTCTGATTCCTCATCATCCCATATAGGAAGCCATGGTGAACATCATCATCATCAACAACAACAAATGCTGAAATTAGGGTTAGGGTTAGGGTTTCAACAAGATTCAATGTTATTGGGGTCATCTAATAATGATCATGATGATGAAAATGGATCATCATGCCAAATTGATTCAACTTGTGGTGGTGGTGGTGGCGATGGTGATTCTCATGATTACAACAAGTGTGGATTGTGGTTTACGCTACGTTCATCTACCAACCGAAGAGGAGAAGCTTTGCCTCAGATACCAAAGGCGTACATTAGAATCAGGGACGAAAACATGACGGTCTTCATGGTTAAAAAATATCTTGTTACAAAACTTGGTCTCTCCAACGAAGCTGAGATTGATATCTTATGCATGGGTGAAAGCTTATCGCAGATACAAACATTGAAGCAAGTAAGAGAGGCTGTTTGGATACCTAGATTGGTAGAATCTTTAGATTCAACAACTTTCTCCCTTGGAGATTCCAATCATAATAATAATGATGATTATATGTCTTTAAACCATATCATGTCTCTGCTTTACCGAAAACATTGCTTTTTAAATTAG 822 0.3783 MASSSHFHHHNHFENTNNFAEQEKEHNSQRHVQQEEEENWLTLGLGLGRNDDVINTSSFNNQVVHHHHGSNNNPQVLLCSDSSSSHIGSHGEHHHHQQQQMLKLGLGLGFQQDSMLLGSSNNDHDDENGSSCQIDSTCGGGGGDGDSHDYNKCGLWFTLRSSTNRRGEALPQIPKAYIRIRDENMTVFMVKKYLVTKLGLSNEAEIDILCMGESLSQIQTLKQVREAVWIPRLVESLDSTTFSLGDSNHNNNDDYMSLNHIMSLLYRKHCFLN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03255 273 Gene3D - 57 234 - -
Aip08g03255 273 PANTHER RING FINGER PROTEIN 23 135 IPR044171 GO:0007275
Aip08g03255 273 PANTHER RING FINGER PROTEIN 147 272 IPR044171 GO:0007275
Aip08g03255 273 MobiDBLite consensus disorder prediction 74 101 - -
Aip08g03255 273 PANTHER - 147 272 - -
Aip08g03255 273 PANTHER - 23 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03255 Aip-Chr8 123583822 123590479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03255 170 221 C3H Transcription Factor Family AT3G23060 44.231 2.49e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03255 - - adu:110274740 436.417