Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03252 ATGGAGAGGACACGATTTGGGCTTTTCTTCTTCCTTCTCTTTCTCCTTGCTTCTCAGATGGTGGTCCAAAGCGAGGGAAGACACTGCGAGTCAAAGAGCCACCGGTTCAAAGGAATGTGCGTTCACGAACGCAACTGTGCTTCGGTTTGTAACTTAGAAGGTTTCTCCGGCGGAAAGTGCCGCGGCTTCCGTCGACGCTGCTTCTGCACCAGGCATTGCTAA 222 0.5225 MERTRFGLFFFLLFLLASQMVVQSEGRHCESKSHRFKGMCVHERNCASVCNLEGFSGGKCRGFRRRCFCTRHC 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03252 73 PANTHER DEFENSIN-LIKE PROTEIN 1 1 73 - -
Aip08g03252 73 Gene3D - 27 73 IPR036574 -
Aip08g03252 73 SMART gth_4 28 73 IPR003614 GO:0006952
Aip08g03252 73 PRINTS Purothionin signature 28 43 IPR008176 GO:0006952
Aip08g03252 73 PRINTS Purothionin signature 58 72 IPR008176 GO:0006952
Aip08g03252 73 ProSitePatterns Gamma-thionins family signature. 27 50 IPR008176 GO:0006952
Aip08g03252 73 PANTHER DEFENSIN 1 73 - -
Aip08g03252 73 SUPERFAMILY Scorpion toxin-like 27 73 IPR036574 -
Aip08g03252 73 CDD Knot1 45 70 IPR003614 GO:0006952
Aip08g03252 73 Pfam Gamma-thionin family 27 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03252 Aip-Chr8 123510386 123511124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03252 7 73 Plant Defensins Gene Families AT2G02130 62.687 5.95e-26 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03252 - - pvu:PHAVU_009G158100g 85.1149