Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03233 ATGGACAAATACGAGGCTGTGAAGGATTTGGGAGCTGGGAATTTCGGTGTTGCCAGGCTCATGAGGAACAAGGTCACAAAGGAGCTCGTCGCAATGAAATACATCGAGCGTGGCCGCAAGATTGATGAGAACGTGGCTAGAGAGATTATCAACCACAGGTCCCTTAGGCACCCCAATATAATTCGTTTCAAGGAGGTGGTGTTGACTCCGACGCATCTAGCTATAGTAATGGAGTATGCTGCCGGAGGAGAACTCTTCGAGAGGATATGCAGTGCTGGCAGGTTCAGTGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATCTCTGGTGTCCATTTCTGTCATAATATGCAAATATGCCACAGAGATTTGAAGCTAGAAAATACCCTTTTAGATGGAAGTCCAGCACCTCGCTTAAAAATTTGTGACTTCGGTTATTCCAAGTCATCTTTGCTGCATTCGCGACCCAAATCAACTGTTGGAACACCAGCTTATATAGCACCGGAGGTTCTTTCTAGGCGAGAGTATGATGGCAAGTTGGCTGATGTGTGGTCATGTGGAGTGACTCTTTATGTCATGTTGGTTGGAGCATATCCATTCGAGGACCAGGATGACCCGAGGAATTTCAGAAAAACAATTCAGCGTATAATGAGTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAGGATTGTAGACAACTTCTCGCTCGTATATTTGTTGCAAATCCATTGAGGAGAATCACACTAAAGGAAATTAAGAACCACCCATGGTTTTTAAAAAATCTTCCAAGAGAGCTAACTGAACCGGCTCAAGCTATCTATTACCAGAGAGACAATCCAAACTTTCATGTTCAGAGTGTGGAGGAGATAATGAAAATTGTGGGAGAGGCGAGAAACCTGCCTCCAGTATCTAGGCCTGTCAAAGGTTTTGGCTGGGAAGGCGAAGATGACGAAGGAGCAGAAGAAGTAGAAGAAGTAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAAGATGAGTATGATAAGAGGGTCAAAGAGGTTCATGCAAGTGGAGAATTCCAAGTTAGTTAA 1074 0.4413 MDKYEAVKDLGAGNFGVARLMRNKVTKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVHFCHNMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMSVQYKIPDYVHISQDCRQLLARIFVANPLRRITLKEIKNHPWFLKNLPRELTEPAQAIYYQRDNPNFHVQSVEEIMKIVGEARNLPPVSRPVKGFGWEGEDDEGAEEVEEVEEEVEEEEEEDEYDKRVKEVHASGEFQVS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03233 357 MobiDBLite consensus disorder prediction 308 357 - -
Aip08g03233 357 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03233 357 MobiDBLite consensus disorder prediction 317 341 - -
Aip08g03233 357 PANTHER SERINE/THREONINE KINASE 2 350 - -
Aip08g03233 357 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03233 357 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Aip08g03233 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Aip08g03233 357 Coils Coil 318 342 - -
Aip08g03233 357 SUPERFAMILY Protein kinase-like (PK-like) 2 293 IPR011009 -
Aip08g03233 357 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03233 357 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Aip08g03233 357 CDD STKc_SnRK2 3 259 - -
Aip08g03233 357 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 350 - -
Aip08g03233 357 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03233 Aip-Chr8 123167105 123169560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03233 3 281 CBL-interacting serine-threonine protein kinases AT4G24400 41.667 4.96e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aip08g03233 Pkinase 6.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03233 K14498 - gmx:547811 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03233 08 123167105 123169560 Aip08g03233 08 123167105 123169560 ECH
Aip03g03378 03 110729112 110732078 Aip08g03233 08 123167105 123169560 PCT