Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03225 ATGAGTGAAGAGGAATTAGATACTCTTTTAATGATGGATATGGAGAAGATCATAGAGCTGTTTGCTGACGACACCGGCGGTAATCAACCACCACAGTTTCAGTCTCCGCCTCTGCCTCGGCCGATCTGGACTAGGGACGAGAACGAACAGTTTGAGATTGTTATTGCTCAATGTTTTATGGAAGCTATAGAGAACCGGTGGGAGGCCGTGGCTGCTCGTCTCCCCGGGAAGACTCCGGCTCAGTTGCAAGAGCGCTTCCAGAAGCTTCTGAATGACATCAGTCTCATCCAAAACGGTTATCTTGTTAATATACATGACTCGTCCATCATCAATGGAACAATACCACCACCAATTTATTGGACTCATCATCATCATCACAGGACGGAGGTAGTGGAGGCTGCAGCGAACAAGGCAGCGCCAATGGAGATTATATTATCGTCGTCAGCCATGGATGCCAAAAGCAACATAATCTCACACAAACCTTTGTCTATGGCTACTAGGAAGAACAATAAACGGAAAATAGTTCATTGTTGGACTGAACAAGAGCATTGCTCGACGCTGACAATAAGAGCTTTCTCTACAGACTCGAACTTGATCCGGCCAACGGCCCGTGCGATCTTGCGCGTGGTTGAAGAGGATGCAGTTGCATGTGAAGATCCCGTAGACCTCGCAGTGGCGGAGATGTGGGAGCGCACGACCTCTAGAAGGCAGAGGGCCAGGGCTCAAAGTTTTAATTTTGGTGCCGAAAGCGAGTCCGCGAAGGTGATGGATAGGAACGAAGCAAGAGAAGCATGTGCGGAGGGAGGAATCGGAGAGAGCGAAGAAGCAGAGGAAAAGGGACACACCGCCACTGTCTTCATAACCCACAGATTTGGCTCCGACACCGGTTGGCTCTTCCAGAAGATCTGCATCCTAGGCCATGGCCGCTCCGATAGTGAATGGGCTTGA 948 0.4979 MSEEELDTLLMMDMEKIIELFADDTGGNQPPQFQSPPLPRPIWTRDENEQFEIVIAQCFMEAIENRWEAVAARLPGKTPAQLQERFQKLLNDISLIQNGYLVNIHDSSIINGTIPPPIYWTHHHHHRTEVVEAAANKAAPMEIILSSSAMDAKSNIISHKPLSMATRKNNKRKIVHCWTEQEHCSTLTIRAFSTDSNLIRPTARAILRVVEEDAVACEDPVDLAVAEMWERTTSRRQRARAQSFNFGAESESAKVMDRNEAREACAEGGIGESEEAEEKGHTATVFITHRFGSDTGWLFQKICILGHGRSDSEWA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03225 315 Gene3D - 40 102 - -
Aip08g03225 315 Pfam Myb-like DNA-binding domain 43 90 IPR001005 -
Aip08g03225 315 SMART sant 39 92 IPR001005 -
Aip08g03225 315 CDD SANT 43 90 IPR001005 -
Aip08g03225 315 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 42 186 IPR043363 -
Aip08g03225 315 ProSiteProfiles Myb-like domain profile. 35 90 IPR001005 -
Aip08g03225 315 SUPERFAMILY Homeodomain-like 41 97 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03225 Aip-Chr8 122994473 122998563 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03225 283 312 Acyl Lipid Metabolism Gene Families AT1G52760 45.455 2.45e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip08g03225 Myb_DNA-binding 5.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03225 - - aip:107611750 346.665