Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03223 ATGGCCGCAGAAATTTGTCGCGCGTCTCCTCTCTTATCCGTTAAAACTCAACTTTTCCACGCGCCACCATCACCAACCACCACCACCACCACTACCAGCAGATTCCACACATCATCTCATTCCAAAACTTCCTTCTTCTCTCATCGCGTTCTCAATCTAAATGCCTCTTTCTCCGCTGTCCGTCGCCGCAGCTCCGCCGTCACCTGCCAGGCTAACACTCTCTTCGAGATCGACTCCGTCGCAAAAGCCGGCCAAGACCGTCTGGAAAAGGTGCCGGTGTCGAATATAAGGAACTTCAGCATAATTGCGCATATTGATCACGGGAAATCCACGTTAGCAGATAAATTGCTTCAGGTTACTGGTACCGTTCACCAGCGAGAGATGAAGGACCAGTTTCTCGATAACATGGACCTCGAGAGAGAAAGAGGCATCACTATTAAGCTCCAGGCAGCTCGAATGCGGTATTTGTTTGAGAATAAACCATATTGCTTGAATTTGATTGATACTCCAGGGCATGTTGACTTCTCGTATGAGGTTTCTCGGTCACTTGCTGCATGTGAGGGTGCTCTTCTTGTAGTAGATGCTTCTCAGGGAGTAGAAGCACAAACGCTAGCTAATGTTTATTTGGCCTTGGAAAACAATCTAGAAATTATCCCAGTTTTGAACAAGATAGATCTTCCGGGTGCTGAACCAGATCGAGTTATTAAGGAGATTGAAGAGGTTGTGGGTCTGGATTGTAGCAATGCTATTCTGTGCTCCGCAAAGGAAGGAATAGGTATAATTGATATTCTCAATGCAATTGTTGCGAGAATTCCACCACCTGCTGATACATCACAAAGGCCATTAAGGGCTTTAATATTTGATAGTTACTATGATCCATATAGAGGTGTTATTGTATACTTTCGGGTTGTGGACGGGACTATAAAGAAAGGTGATAGAGTCTATTTTATGGCTAGTGGGAAGGATTATTTTGCTGATGAAATTGGAGTTTTGTCTCCGAATCAACAAGAGGTTAAAGAATTATATGCTGGAGAGGTGGGCTACCTGTCGGCGTCAATAAGAACAGTAGCTGATGCCAGAGTGGGTGACACAGTGACTCACTATGGTCGAAAGGCAGATCAATCACTCCCTGGATACGAGGAAGCGACTCCTATGGTGTTTTGTGGCCTGTTTCCTGTTGACGCTGACCAATTTCCTGATCTACGTGATGCCCTTGAGAAGCTACAACTTAATGATGCTGCACTGAAGTTTGAACCGGAGACTTCAAGTGCCATGGGATTTGGGTTTAGATGTGGGTTTCTGGGTCTTCTCCACATGGAAATTGTCCAGGAAAGACTTGAGAGAGAATACAATCTGAGCTTGATAACTACCGCTCCAAGTGTTGTTTACAGAGTGAACTGTGTAGATGGAGATACTGTTGAATGCTCGAATCCATCTTTACTTCCTGAACCTGGAAAAAGGAGATCAATTGAGGAGCCATATGTTAAGATTGAGATGCTTTCGCCAAAGGATTATATCGGGTCACTTATGGAACTGGGACAAGACAGAAGAGGATTGTTTAAAGAAATGAAGTTTATCACTGAAAATAGAGCATCAATCACCTACGAAATACCACTAGCGGAGATGGTTGGTGATTTCTTTGACCAGTTAAAGTCGAGAAGTAAAGGTTATGCTAGTATGGAGTATACCTTTATCGGGTACAGAGAAAGTGATTTAATTAAACTTGACATATTGATAAATGGTGACAGTGTGGAGCCATTGGCTACGATTGTCCACAGAGATAAGGCATATTCTGTGGGAAGGGCTTTGACTCAAAAGCTGAAGGAGCTCATACCACGTCAAATGTTTAAAGTACCAATCCAAGCATGCATAGGATCAAAAGTGATTGCTAGTGAAGCTTTATCTGCAATAAGGAAGGATGTATTAGCCAAATGTTATGGTGGCGACATTTCGAGGAAAAAGAAGTTACTTAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAGTCCATTGGTAAAGTTGATGTGCCTCAAGAAGCTTTCATGGCGGTCTTGAAATTGGAAAAGGAGGTGATATGA 2076 0.433 MAAEICRASPLLSVKTQLFHAPPSPTTTTTTTSRFHTSSHSKTSFFSHRVLNLNASFSAVRRRSSAVTCQANTLFEIDSVAKAGQDRLEKVPVSNIRNFSIIAHIDHGKSTLADKLLQVTGTVHQREMKDQFLDNMDLERERGITIKLQAARMRYLFENKPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVIKEIEEVVGLDCSNAILCSAKEGIGIIDILNAIVARIPPPADTSQRPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPNQQEVKELYAGEVGYLSASIRTVADARVGDTVTHYGRKADQSLPGYEEATPMVFCGLFPVDADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVDGDTVECSNPSLLPEPGKRRSIEEPYVKIEMLSPKDYIGSLMELGQDRRGLFKEMKFITENRASITYEIPLAEMVGDFFDQLKSRSKGYASMEYTFIGYRESDLIKLDILINGDSVEPLATIVHRDKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03223 691 SUPERFAMILY EF-G C-terminal domain-like 383 461 IPR035647 -
Aip08g03223 691 Gene3D Translation factors 277 376 - -
Aip08g03223 691 CDD EF4_III 384 459 - -
Aip08g03223 691 PRINTS GTP-binding elongation factor signature 98 111 IPR000795 GO:0003924|GO:0005525
Aip08g03223 691 PRINTS GTP-binding elongation factor signature 141 149 IPR000795 GO:0003924|GO:0005525
Aip08g03223 691 PRINTS GTP-binding elongation factor signature 165 175 IPR000795 GO:0003924|GO:0005525
Aip08g03223 691 PRINTS GTP-binding elongation factor signature 181 192 IPR000795 GO:0003924|GO:0005525
Aip08g03223 691 PRINTS GTP-binding elongation factor signature 217 226 IPR000795 GO:0003924|GO:0005525
Aip08g03223 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 292 IPR027417 -
Aip08g03223 691 Hamap Elongation factor 4 [lepA]. 91 689 IPR006297 GO:0005525
Aip08g03223 691 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 94 275 IPR000795 GO:0003924|GO:0005525
Aip08g03223 691 Gene3D Elongation Factor G (Translational Gtpase), domain 3 377 458 - -
Aip08g03223 691 Pfam Elongation factor Tu GTP binding domain 95 272 IPR000795 GO:0003924|GO:0005525
Aip08g03223 691 Gene3D - 93 276 IPR027417 -
Aip08g03223 691 CDD lepA_C 492 571 IPR035654 -
Aip08g03223 691 SMART EFG_C_a 489 577 IPR000640 -
Aip08g03223 691 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 88 688 IPR027518 -
Aip08g03223 691 Pfam GTP-binding protein LepA C-terminus 579 685 IPR013842 -
Aip08g03223 691 Gene3D - 459 570 - -
Aip08g03223 691 TIGRFAM small_GTP: small GTP-binding protein domain 97 266 IPR005225 GO:0005525
Aip08g03223 691 CDD LepA 97 274 - -
Aip08g03223 691 Pfam Elongation factor Tu domain 2 296 366 IPR004161 GO:0005525
Aip08g03223 691 CDD EF4_II 282 367 - -
Aip08g03223 691 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 84 685 - -
Aip08g03223 691 Gene3D - 571 645 IPR038363 -
Aip08g03223 691 SUPERFAMILY EF-G C-terminal domain-like 490 584 IPR035647 -
Aip08g03223 691 PANTHER TRANSLATION FACTOR GUF1-RELATED 84 685 IPR006297 GO:0005525
Aip08g03223 691 SUPERFAMILY Translation proteins 256 378 IPR009000 -
Aip08g03223 691 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 134 149 IPR031157 -
Aip08g03223 691 TIGRFAM lepA: elongation factor 4 95 686 IPR006297 GO:0005525
Aip08g03223 691 Pfam Elongation factor G C-terminus 490 576 IPR000640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03223 Aip-Chr8 122973794 122983080 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03223 96 329 Eukaryotic Initiation Factors Gene Family AT3G22980 34.413 3.17e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03223 K21594 - gmx:100809693 1142.87