Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03221 ATGGAGAAATTGAAGGTCATCATCATGTTTACTATCTCCATTGTGTTCATTGGTGATGATGATGATGATGATGGTAGCTTGTATTTCTCTGATGCAGAAGACGACGGTTCAAGCCATTCTCATTTCTATTCAACACATGGTGATGGTGGTTCAGCATTTGATGATTATAGCTTCTCATGTGTCTCTGATCTTGAAGCTGCTGCTGTTGTTCATGATTCTGGGAGGGAAATTGTAGAATTTGTCATATGGTGCTACATACCCTTTGATGCAAAAGCTAAGGCAAGTTTTGAAGTTGAGGGTGCAAGAATTGCATATGAGAATGGACAAAGTGTGTTACCAAACAAGATCAAGGAGTGCAGGTCCTATCCATTGTACAAGTTTGTGAGGGAGGAGTTGGGGACTGAGATGCTAACTGGTGAGAAGGTTAGGTCACCTGGTGAAGGATGTGACAAATTGTTCACGGCAATGTGCCAAGGGAAGATCATTGATCCTCTTCTAGAGTGCATTGCAGAGTGGAATGGTGCTCCTCTTCCATTATGTTAG 543 0.4217 MEKLKVIIMFTISIVFIGDDDDDDGSLYFSDAEDDGSSHSHFYSTHGDGGSAFDDYSFSCVSDLEAAAVVHDSGREIVEFVIWCYIPFDAKAKASFEVEGARIAYENGQSVLPNKIKECRSYPLYKFVREELGTEMLTGEKVRSPGEGCDKLFTAMCQGKIIDPLLECIAEWNGAPLPLC 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03221 180 Gene3D Fumarase/aspartase (Central domain) 115 175 - -
Aip08g03221 180 SUPERFAMILY L-aspartase-like 89 180 IPR008948 GO:0003824
Aip08g03221 180 Gene3D - 91 114 IPR023144 -
Aip08g03221 180 PANTHER HISTIDINE AMMONIA-LYASE 91 180 IPR001106 -
Aip08g03221 180 PANTHER PHENYLALANINE AMMONIA-LYASE 1 91 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03221 Aip-Chr8 122956018 122960802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03221 88 180 Monolignol Biosynthesis Gene Families AT2G37040 69.474 2.25e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03221 K10775 - adu:107463173 284.648