Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03219 ATGTCGCTGTTCAAAAAGTTCTTCTACCGGCAGCCGCCGGATCGACTCCTTGAGGTCTCCGAGAGGGTCTTTGTATTTGACTGTTGCTTCTCGACGAATGTGATGGAAAAAGAAGCGTACAAAGATTATATAGGGGGAATAGTAGCAGATCTACAATATCTGTTTCCAGATGCTTCAATCATGGTATTCAATTTCAGAGAAGGGGGAACGCGGAGCCAGATATCAGATGTGTTGGCACAATTTGACATGACGGTTATGGAGTACCCTCAGCAATATGAGGGTTGTCCATTACTCCCTCTGGAGATGGTGCACCATTTCCTCCGATCAAGTGAAAGCTGGTTGTCTGTGGAGGGGCAGCAAAACGTGGTGTTATTTCATTGCGAAAGGGGGGGTTGGCCTGTCTTGGCGTTCATGCTAGCAGGTCTTCAATTGTACAGGAAGTGGTATACAGCGGAGTTGAGGAGTCTTGAAATGCTGTACAAGCTAGCATCTAAAGAACTCTTGCAACTCGCATCTCCTTTGAATCCCCAACCTTCTCAGTTGAGATATCTCCAGTATGTTTCCAGAATTTTGGGTTCTGAGTGGTCTCCACAAGAAACACCCTTGCTTTTGTACTGTTTGATCCTCAGAGACCTTCCATTGTTTGGTGGTGGAGAAGGTTGCAGGCCAATTGTTCGTGTCTATGGTCCAGACCCTACAAGACCTGCCAATAGTAGCTCTAACATTCTTTTTGAAACTCCAGGTTCCCTCATTCGACACTACCCGCAGGCAGAATGTACACCCGTGGGAATTGATATCTATTGTTGTGTTCAAGGGGATGTTGTTCTTGAATGCATACATTTGAGTGAAGATTTAGTTCACGAGGAAATGATGTTTAGAATAATGTTTCATACTGCATTTGTTCACTCAAACATATTGATCTTGAGGCGTGACGATATTGATGTTGTGTGGGATTCAAAGGAGCAGTTTCCCAAGGACTTTGAAGCAGAGGTGCTTTTCTTGGACGTTTATGATCTTGTACATAATCTATCCCCAGGCAACGTAAGCCGAGATATAAGTGACACTGAAAGTGATTCATCAGATGAGTTCTTTGAAGTGGAAGAGATCTTTACGAATACAATTGATGCACTTGAAGGTAGAGGAGAATTTGGCTCTCCTTCAGATCCTCTTACTTCTCAAGACTCTACTTCAGATGATGGGAGTCACCAACAGGAGGTTGGAATGGTAGAATCCGGTATTAACACAGTTAAAGATATTGTTGTTGATGATGTCAAATATAAGTTTCAAGGGATGACAGATTCGGATCCTCATGAGGTTAGAGACATTGTTGTCGATGAAGTGGAGATTAAGTCGAATTCAACTGCAGACAATATGGATTTGCAAGATGAGGAGGTGACAATTATGCAGAAAAATTTTGATGAAGGGGAGGAAAAGCATGATCTTTCTATGTCACATTCTGCTCATAAACTACATTCATCAGTTAATGACCCACCTCTTGAGTCAACCACAACTTAA 1515 0.4277 MSLFKKFFYRQPPDRLLEVSERVFVFDCCFSTNVMEKEAYKDYIGGIVADLQYLFPDASIMVFNFREGGTRSQISDVLAQFDMTVMEYPQQYEGCPLLPLEMVHHFLRSSESWLSVEGQQNVVLFHCERGGWPVLAFMLAGLQLYRKWYTAELRSLEMLYKLASKELLQLASPLNPQPSQLRYLQYVSRILGSEWSPQETPLLLYCLILRDLPLFGGGEGCRPIVRVYGPDPTRPANSSSNILFETPGSLIRHYPQAECTPVGIDIYCCVQGDVVLECIHLSEDLVHEEMMFRIMFHTAFVHSNILILRRDDIDVVWDSKEQFPKDFEAEVLFLDVYDLVHNLSPGNVSRDISDTESDSSDEFFEVEEIFTNTIDALEGRGEFGSPSDPLTSQDSTSDDGSHQQEVGMVESGINTVKDIVVDDVKYKFQGMTDSDPHEVRDIVVDEVEIKSNSTADNMDLQDEEVTIMQKNFDEGEEKHDLSMSHSAHKLHSSVNDPPLESTTT 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03219 504 Pfam C2 domain of PTEN tumour-suppressor protein 198 333 IPR014020 -
Aip08g03219 504 MobiDBLite consensus disorder prediction 378 404 - -
Aip08g03219 504 Gene3D Protein tyrosine phosphatase superfamily 14 203 IPR029021 -
Aip08g03219 504 Gene3D - 204 333 - -
Aip08g03219 504 MobiDBLite consensus disorder prediction 472 504 - -
Aip08g03219 504 MobiDBLite consensus disorder prediction 487 504 - -
Aip08g03219 504 ProSiteProfiles C2 tensin-type domain profile. 199 336 IPR014020 -
Aip08g03219 504 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 191 IPR029021 -
Aip08g03219 504 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 333 IPR035892 -
Aip08g03219 504 MobiDBLite consensus disorder prediction 386 404 - -
Aip08g03219 504 MobiDBLite consensus disorder prediction 472 486 - -
Aip08g03219 504 SMART PTEN_C2_2 197 335 IPR014020 -
Aip08g03219 504 PANTHER FORMIN-J 1 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03219 Aip-Chr8 122931341 122934108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03219 1 497 FH2 protein (formin) Gene Family AT5G07740 55.769 4.32e-180 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03219 - - adu:107463172 818.535